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21 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Non-coding RNA profiling by high throughput sequencing	Triticum aestivum		SRA Run Selector
GSE29243	High through put screen of small RNA in parental, hybrid and allopolyploid wheat	Non-coding RNA profiling by high throughput sequencing	Aegilops tauschii Triticum aestivum Triticum turgidum subsp. durum	4	TXT SRA Run Selector	Avraham Levy	May 13, 2011
GSE56587	mRNA and sRNA Transcriptomes Reveal Insights into Dynamic Homoeolog Regulation for Allopolyploid Heterosis in Nascent Hexaploid Wheat	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Aegilops tauschii Triticum aestivum Triticum turgidum	50	TXT SRA Run Selector	Mengdi Liu	Oct 20, 2014
GSE154165	tRNA-seq and YAMAT-seq profiling the expressions of tRNA-derived fragments and tRNAs in plants	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana Glycine max Hordeum vulgare Setaria italica Sorghum bicolor Triticum aestivum Zea mays	13	TXT XLSX SRA Run Selector	Xuan Ma	Jan 01, 2021
GSE16177	Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in T. aestivum and B. distachyon	Non-coding RNA profiling by high throughput sequencing	Brachypodium distachyon Triticum aestivum	3	SRA Run Selector	bo wei	Jun 08, 2009
GSE22048	Small RNAs in transgenic TaNAM-RNAi wheat plants	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	1	TXT SRA Run Selector	Dario Cantu	May 29, 2010
GSE27327	Genome-wide sequencing small RNAs in response to powdery mildew and heat stress in wheat	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	6	SRA Run Selector	mingming xin	Feb 15, 2011
GSE36867	Uncovering small RNA-mediated responses to cold stress in a wheat thermosensitive genic male sterile line by deep sequencing	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	7	TXT SRA Run Selector	Zhonghui Tang	Mar 29, 2012
GSE50524	Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	5	FA SRA Run Selector	Han Ran	Jan 01, 2017
GSE53487	A Comprehensive Genome-wide Study on Tissue- and Abiotic Stress-specific miRNAs in Triticum aestivum	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	8	TXT SRA Run Selector	Gopal Joshi	Aug 20, 2014
GSE54026	Dynamics and Characterization of Small RNAs of Virus and Host Origin from Wheat Streak Mosaic Virus- and/or Triticum Mosaic Virus-infected Susceptible and Temperature-Sensitive Resistant Wheat Cultivars	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	16	TXT SRA Run Selector	Jean-Jack M. Riethoven	Dec 01, 2014
GSE61565	Characterization of the complete genome sequence of Barley yellow striate mosaic virus reveals an overprinted ancillary gene encoding a small hydrophobic protein	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	2	TXT SRA Run Selector	Xian-Bing Wang	Sep 15, 2015
GSE65797	Expression profiling of small RNAs in developing wheat grains	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	4	TXT SRA Run Selector	Tian Li	Jan 01, 2016
GSE83738	Deep sequencing of wheat sRNA transcriptome reveals distinct temporal expression pattern of miRNAs in response to heat, light and UV	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	72	XLS SRA Run Selector	Sylvie Cloutier	Jan 17, 2017
GSE113357	MicroRNA-guided regulation of heat stress response in wheat	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	24	XLSX SRA Run Selector	Sylvie Cloutier	May 08, 2019
GSE121903	Distinct chromatin signitures of promoters, enhancers and transposons in allohexaploid wheat	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	18	BED BW TXT SRA Run Selector	yijing zhang	Jun 21, 2019
GSE125391	Identification and Temporal Expression Analysis of Conserved and Novel MicroRNAs in the Leaves of Winter Wheat Grown in the Field	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	4	TXT SRA Run Selector	kangning wei	Oct 01, 2019
GSE139019	An atlas of wheat epigenetic regulatory elements reveals subgenome-divergence in the regulation of development and stress responses	Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Triticum aestivum	124	BED BW TXT SRA Run Selector	yijing zhang	Feb 04, 2021
GSE139020	Homology-mediated inter-chromosomal interactions in hexaploid wheat lead to specific subgenome territories following polyploidization and introgression	Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Triticum aestivum	9	BED TDF TXT SRA Run Selector	yijing zhang	Nov 30, 2020
GSE155963	Temporal expression study of microRNAs in crown tissues of winter wheat grown under natural growth condition	Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	4	TXT SRA Run Selector	Miao Zhao	Nov 10, 2021
GSE158213	Genome-wide Identification of Fusarium graminearum-Responsive lncRNAs in Triticum aestivum	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Triticum aestivum	4	FA TXT SRA Run Selector	Xiaoxin Duan	Sep 18, 2023