Identification of Replication Timing Domains Using DNN-HMM

Comparative epigenomics of human and mouse erythropoiesis

CpG island mediated linear and spatial gene partitioning (ChIP-seq)

CpG island mediated linear and spatial gene partitioning (other data sets)

The repressive genome compartment is established early in the cell cycle before forming the lamina associated domains II (re-analysis)

Central clock components modulate plant shade avoidance by directly repressing transcriptional activation activity of PHYTOCHROME-INTERACTING FACTORS

Epigenetic reprogramming events rewire transcription during the alternation of generations in Arabidopsis [DNA methylation]

Epigenetic reprogramming events rewire transcription during the alternation of generations in Arabidopsis [Small RNA-Seq]

DBX2 REGULATION IN LIMBS SUGGESTS INTER-TAD SHARING OF ENHANCERS [HiC reanalysis]

EWS/FLI mediated reprogramming of 3D chromatin promotes an altered transcriptional state in Ewing sarcoma (Cut&Tag III)

Identification of bivalent genes in CD14+ Monocytes

Reanalysis of TSA-Seq mapping to determine genomic coordinates for speckles-associated domains.

UTX inhibition as selective epigenetic therapy against TAL1-driven T cell acute lymphoblastic leukemia

Identification of active transcriptional regulatory elements with GRO-seq

Evidence That Three Classes of Methylomes Specific for Stem, Somatic and Transformed Cells Are Set by Three Independent Mechanisms (Methyl-Seq)

Genomic distribution of the cohesin subunit Stromalin (SA) in wild-type and Haspin knock-down Drosophila melanogaster Kc167 cells

A chondrocyte-specific Indian hedgehog enhancer activated in both skeletal development and postnatal cartilage degeneration [ChIP-seq]

Rev-erb(alpha) and (beta) Coordinately Protect the Circadian Clock and Normal Metabolic Function

Nuclear receptor Nur77 limits the macrophage inflammatory response by reprogramming mitochondrial metabolism (ChIP-seq)

BAMscale: quantification of DNA sequencing peaks and generation of scaled coverage tracks