67 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE53984
Identification of Replication Timing Domains Using DNN-HMM
  • Third-party reanalysis
  • Other
  • Download icon BED
Wenjie Shu May 25, 2015
GSE59801
Comparative epigenomics of human and mouse erythropoiesis
Vijay G Sankaran Dec 01, 2014
GSE80791
CpG island mediated linear and spatial gene partitioning (ChIP-seq)
  • Download icon BED
Jonghwan Kim Feb 15, 2018
GSE80795
CpG island mediated linear and spatial gene partitioning (other data sets)
Jonghwan Kim Feb 15, 2018
GSE97092
The repressive genome compartment is established early in the cell cycle before forming the lamina associated domains II (re-analysis)
  • Other
  • Third-party reanalysis
Karen Reddy Mar 27, 2020
GSE136843
Central clock components modulate plant shade avoidance by directly repressing transcriptional activation activity of PHYTOCHROME-INTERACTING FACTORS
Yu Zhang Sep 01, 2020
GSE155367
Epigenetic reprogramming events rewire transcription during the alternation of generations in Arabidopsis [DNA methylation]
Michael Borg Jan 26, 2021
GSE155368
Epigenetic reprogramming events rewire transcription during the alternation of generations in Arabidopsis [Small RNA-Seq]
Michael Borg Jan 26, 2021
GSE161378
DBX2 REGULATION IN LIMBS SUGGESTS INTER-TAD SHARING OF ENHANCERS [HiC reanalysis]
  • Other
  • Third-party reanalysis
Lucille Lopez-Delisle Jan 23, 2021
GSE185128
EWS/FLI mediated reprogramming of 3D chromatin promotes an altered transcriptional state in Ewing sarcoma (Cut&Tag III)
Iftekhar Ahmed Showpnil Aug 15, 2022
GSE226811
Identification of bivalent genes in CD14+ Monocytes
Sylvain Fraineau Apr 24, 2023
GSE248644
Reanalysis of TSA-Seq mapping to determine genomic coordinates for speckles-associated domains.
  • Third-party reanalysis
  • Other
Parmit Kumar Singh Dec 01, 2023
GSE64832
UTX inhibition as selective epigenetic therapy against TAL1-driven T cell acute lymphoblastic leukemia
2 Ottawa Hospital Research Institute Feb 01, 2016
GSE66031
Identification of active transcriptional regulatory elements with GRO-seq
2 Charles G Danko Feb 19, 2015
GSE84998
Evidence That Three Classes of Methylomes Specific for Stem, Somatic and Transformed Cells Are Set by Three Independent Mechanisms (Methyl-Seq)
2 Boris Bartholdy Jul 23, 2019
GSE118813
Genomic distribution of the cohesin subunit Stromalin (SA) in wild-type and Haspin knock-down Drosophila melanogaster Kc167 cells
2 Oscar Reina Garcia Jul 02, 2022
GSE129025
A chondrocyte-specific Indian hedgehog enhancer activated in both skeletal development and postnatal cartilage degeneration [ChIP-seq]
2 Shinsuke Ohba Mar 31, 2020
GSE36375
Rev-erb(alpha) and (beta) Coordinately Protect the Circadian Clock and Normal Metabolic Function
3 Logan J Everett Mar 09, 2012
GSE102393
Nuclear receptor Nur77 limits the macrophage inflammatory response by reprogramming mitochondrial metabolism (ChIP-seq)
3 Carlie de Vries Aug 21, 2018
GSE131417
BAMscale: quantification of DNA sequencing peaks and generation of scaled coverage tracks
  • Other
  • Third-party reanalysis
3 Lorinc Pongor May 17, 2020