GEO Browser - GEO

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213 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Third-party reanalysis	Mus musculus
GSE99921	Extensive sex differences at the initiation of meiotic recombination	Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis Methylation profiling by high throughput sequencing	Mus musculus	22	BAM BED BEDGRAPH SRA Run Selector	Kevin Brick	Sep 20, 2018
GSE36375	Rev-erb(alpha) and (beta) Coordinately Protect the Circadian Clock and Normal Metabolic Function	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	3	BED TXT SRA Run Selector	Logan J Everett	Mar 09, 2012
GSE59801	Comparative epigenomics of human and mouse erythropoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Austrofundulus limnaeus Homo sapiens Mus musculus		BED BW TXT	Vijay G Sankaran	Dec 01, 2014
GSE61775	Context-specific regulation of BMAL1 target genes during the circadian cycle in mammals	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Expression profiling by high throughput sequencing	Mus musculus	58	BED BW WIG SRA Run Selector	Jonathan Aryeh Sobel	Dec 31, 2016
GSE80791	CpG island mediated linear and spatial gene partitioning (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus		BED	Jonghwan Kim	Feb 15, 2018
GSE80795	CpG island mediated linear and spatial gene partitioning (other data sets)	Third-party reanalysis Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus		BED TXT	Jonghwan Kim	Feb 15, 2018
GSE88699	High activity of a broad panel of housekeeping and tissue-specific cis-regulatory elements depends on a subset of ETS proteins	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	15	BED BIGWIG TXT SRA Run Selector	Alberto Termanini	Mar 13, 2017
GSE88702	High activity of a broad panel of housekeeping and tissue-specific cis-regulatory elements depends on a subset of ETS proteins	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis	Mus musculus	23	BED BIGWIG	Alberto Termanini	Mar 13, 2017
GSE96744	Epigenetic identity in AML is mostly dependent on disruption of non-promoter regulatory elements and reveals potentially antagonistic effects of mutations in epigenetic modifiers [mouse]	Methylation profiling by high throughput sequencing Third-party reanalysis	Homo sapiens Mus musculus	7	BED TXT SRA Run Selector	Jacob Lowell Glass	Apr 28, 2017
GSE97092	The repressive genome compartment is established early in the cell cycle before forming the lamina associated domains II (re-analysis)	Other Third-party reanalysis	Mus musculus		BED BW TXT	Karen Reddy	Mar 27, 2020
GSE97095	Lamina Associated Domains dependent of chromatin state and A-type lamins	Other Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	28	BED	Karen Reddy	Mar 27, 2020
GSE99991	Investigating the role of SMCHD1 in de novo X chromosome inactivation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis	Mus musculus	53	BED BEDGRAPH BW TXT SRA Run Selector	Chen-Yu Wang	Jun 07, 2018
GSE100893	PARP14 controls the nuclear accumulation of a subset of type I Interferon-inducible proteins	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	25	BED	Viviana Piccolo	Feb 07, 2018
GSE102393	Nuclear receptor Nur77 limits the macrophage inflammatory response by reprogramming mitochondrial metabolism (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	3	BED BIGWIG TXT SRA Run Selector	Carlie de Vries	Aug 21, 2018
GSE102394	Nuclear receptor Nur77 limits the macrophage inflammatory response by reprogramming mitochondrial metabolism	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	9	BED BIGWIG TXT	Carlie de Vries	Aug 21, 2018
GSE112110	Genome wide map of DMC1 in testis of Stag3-/-, Rec8-/- and Stag3-/-Rec8-/- mice.	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	14	BED BEDGRAPH TXT SRA Run Selector	Mary Ann Handel	Mar 07, 2019
GSE123131	Benchmarking of 4C-seq pipelines based on real and simulated data	Other Third-party reanalysis	Homo sapiens Mus musculus	6	BED XLSX SRA Run Selector	Frank Rosenbauer	May 29, 2019
GSE128818	Aberrant phase separation of transcription factors in human developmental disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Gallus gallus Mus musculus	19	BED BW MTX TSV SRA Run Selector	Denes Hnisz	May 07, 2020
GSE129025	A chondrocyte-specific Indian hedgehog enhancer activated in both skeletal development and postnatal cartilage degeneration [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	2	BED SRA Run Selector	Shinsuke Ohba	Mar 31, 2020
GSE131417	BAMscale: quantification of DNA sequencing peaks and generation of scaled coverage tracks	Other Third-party reanalysis	Homo sapiens Mus musculus	3	BED BW SRA Run Selector	Lorinc Pongor	May 17, 2020