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13 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Third-party reanalysis	Arabidopsis thaliana			SRA Run Selector
GSE120653	TREE1-EIN3 mediated transcriptional repression inhibits shoot growth in the response to ethylene	Expression profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana	2		DIFF SRA Run Selector	Hong Qiao	Nov 04, 2020
GSE120668	Targeted reprogramming of H3K27me3 resets epigenetic memory in plant paternal chromatin	Expression profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana	3		TXT SRA Run Selector	Michael Borg	Mar 17, 2020
GSE71397	Identification of Arabidopsis thaliana PRR9 regulated clock components and circadian outputs through genome-wide binding sites analysis	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana	4		BED TXT XLS SRA Run Selector	Tiffany L Liu	Dec 03, 2015
GSE126930	Paternally-acting canonical RNA-directed DNA methylation pathway genes sensitizes Arabidopsis endosperm to paternal dosage [miRNA-Seq]	Non-coding RNA profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana	4		BEDGRAPH SRA Run Selector	satyaki P Rajavasireddy	May 01, 2019
GSE130290	ChIP-seq of DRD1, DMS3 and RDM1 in Arabidopsis	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana	4		BED BW SRA Run Selector	Steven E. Jacobsen	Jul 09, 2019
GSE125378	Distinct characteristics of Arabidopsis thaliana circular RNAs	Expression profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana	9		TXT SRA Run Selector	Sascha Laubinger	Jan 24, 2019
GSE126931	Paternally-acting canonical RNA-directed DNA methylation pathway genes sensitizes Arabidopsis endosperm to paternal dosage [RNA-Seq]	Expression profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana	10		XLSX SRA Run Selector	satyaki P Rajavasireddy	May 01, 2019
GSE68860	Genome-wide single-molecule sequencing of 6-methyladenine in eukaryotes	Methylation profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana Auricularia delicata Caenorhabditis elegans Chlamydomonas reinhardtii Drosophila melanogaster Nannochloropsis oceanica Saccharomyces cerevisiae	11		BW CSV GFF SRA Run Selector	Denis Tolkunov	Sep 01, 2017
GSE96994	DDM1/Lsh remodelers allow methylation of DNA wrapped in nucleosomes	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana	15		BED BW GFF TXT SRA Run Selector	David B. Lyons	Nov 15, 2017
GSE138154	EIN3 positive feedback regulation on EIN2C-mediated histone acetylation and gene expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana	16		TXT XLS SRA Run Selector	Hong Qiao	Nov 19, 2020
GSE64463	Rate, spectrum, and evolutionary dynamics of spontaneous epimutations	Methylation profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana	19		TXT SRA Run Selector	Robert J Schmitz	May 13, 2015
GSE152766	Single-cell RNA-seq data of Arabidopsis root	Expression profiling by high throughput sequencing Third-party reanalysis	Arabidopsis thaliana	19		RDS TAR SRA Run Selector	Philip N. Benfey	Jul 02, 2020
GSE75071	On the Origin and Evolutionary Consequences of Gene Body DNA Methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Arabidopsis lyrata Arabidopsis thaliana Brassica oleracea Brassica rapa Capsella rubella Eutrema salsugineum	44		BED TSV SRA Run Selector	Robert J Schmitz	Jul 11, 2016