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104510 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing
GSE5343	Small RNA identification in Arabidopsis thaliana using 454 data	Expression profiling by high throughput sequencing Expression profiling by MPSS	Arabidopsis thaliana	6		Blake C. Meyers	Sep 08, 2006
GSE9306	Short RNA profiling of ES cells with and without Dicer	Expression profiling by high throughput sequencing Methylation profiling by array	Mus musculus	4		J. Mauro Calabrese	Oct 31, 2007
GSE10119	Metatranscriptomes of phytoplankton blooms from an ocean acidification mesocosm experiment	Expression profiling by high throughput sequencing	marine metagenome	4	XLS SRA Run Selector	Jack Anthony Gilbert	Feb 08, 2008
GSE10877	Highly integrated single base resolution maps of the epigenome in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Methylation profiling by array Methylation profiling by high throughput sequencing	Arabidopsis thaliana	16	CEL TXT	Joseph R Ecker	Apr 21, 2008
GSE10968	Highly integrated epigenome maps in Arabidopsis - transcriptome sequencing	Expression profiling by high throughput sequencing	Arabidopsis thaliana	4	TXT SRA Run Selector	Joseph R Ecker	Apr 21, 2008
GSE11209	The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing	Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	1	TXT SRA Run Selector	Zhong Wang	May 05, 2008
GSE11007	Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome	Expression profiling by high throughput sequencing	Arabidopsis thaliana	4	FNA TXT	Michael J Axtell	May 08, 2008
GSE11070	A link between RNA metabolism and silencing affecting Arabidopsis development	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by genome tiling array	Arabidopsis thaliana	22	CEL TXT SRA Run Selector	Joseph R Ecker	May 15, 2008
GSE7055	Expression of microRNAs and Protein-coding Genes Associated with Perineural Invasion in Prostate Cancer	Expression profiling by array Non-coding RNA profiling by array Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	114	CEL GPR	Robert Scott Hudson	Jul 01, 2008
GSE11892	A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	11	TXT SRA Run Selector	Marc Sultan	Jul 03, 2008
GSE11724	Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	TXT SRA Run Selector	Whitehead Institute	Jul 30, 2008
GSE12075	The impact of microRNAs on protein output	Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	24	CEL TXT	Whitehead Institute	Jul 30, 2008
GSE12416	TRAMP-mediated RNA surveillance prevents spurious entry of RNAs into the S. pombe siRNA pathway	Expression profiling by high throughput sequencing	Schizosaccharomyces pombe	2	SRA Run Selector	Noah Spies	Sep 02, 2008
GSE11839	Differentiation associated changes in gene expression profiles for interstitial cystitis and control urothelial cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	12	CEL PDF	Deborah Erickson	Sep 05, 2008
GSE12946	Alternative Isoform Regulation in Human Tissue Transcriptomes	Expression profiling by high throughput sequencing	Homo sapiens	16	TXT SRA Run Selector	Shujun Luo	Oct 01, 2008
GSE10782	Solexa / Illumina deep sequencing of the hippocampal transcriptome of wild-type and DLCK transgenic mice	Expression profiling by high throughput sequencing	Mus musculus	8		Peter A.C. 't Hoen	Oct 17, 2008
GSE13441	Drosophila melanogaster short read RNA	Expression profiling by high throughput sequencing	Drosophila melanogaster	5	TXT SRA Run Selector	Marijke Jeltje van Baren	Nov 04, 2008
GSE12297	mRNA Sequencing Reveals Altered Synaptic Vesicular Transport in Post-Mortem Cerebellum	Expression profiling by high throughput sequencing	Homo sapiens	20		Stephen Kingsmore	Nov 12, 2008
GSE13652	Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing	Expression profiling by high throughput sequencing	Homo sapiens	6	TXT SRA Run Selector	Weijun Gao	Nov 19, 2008
GSE11801	Annotating Low Abundance and Transient RNAs in Yeast using Ultra High-throughput Sequencing	Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	16	TXT SRA Run Selector	Gavin Sherlock	Dec 18, 2008