GEO Browser - GEO

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3416 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			BED
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE23416	Reprogramming of Human Fibroblasts into Hematopoietic Progenitors by Fusion With Human Fetal Liver CD34+ Cells	Expression profiling by array Expression profiling by high throughput sequencing Genome variation profiling by SNP array SNP genotyping by SNP array	Homo sapiens	8	BED CEL CHP TXT	Vladislav M Sandler	Aug 04, 2011
GSE23622	Mechanisms Establishing TLR4-Responsive Activation States of Inflammatory Response Genes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	55	BED FA TXT	Christopher Benner	Jan 01, 2011
GSE24176	Expression data from Pseudomonas putida KT2440	Expression profiling by array Expression profiling by high throughput sequencing	Pseudomonas putida KT2440	9	BED CEL TXT	Sarah Frank	Mar 25, 2011
GSE25292	Altered antisense-to-sense transcript ratios in breast cancer	Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	28	BED TXT	Kornelia Polyak	Dec 10, 2010
GSE27824	Reprogramming Transcriptional Responses through Functionally-Distinct Classes of Enhancers in Prostate Cancer Cells	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	42	BED BEDGRAPH FA	Christopher Benner	May 15, 2011
GSE28500	Genome-wide Regulation of 5hmC, 5mC and Gene Expression by Tet1 Hydroxylase in Mouse Embryonic Stem Cells	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	23	BED CEL	Feizhen Wu	Apr 21, 2011
GSE30761	Mammalian X upregulation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Mus musculus Mus musculus x Mus spretus	60	BED BIGWIG CEL GFF PAIR TXT	Xinxian Deng	Jul 19, 2011
GSE32120	The little elongation complex (LEC) regulates small nuclear RNA transcription	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	22	BED CEL SRA Run Selector	Alexander (Garrett) Garruss	Dec 22, 2011
GSE32228	Toward an integrated model of capsule regulation in Cryptococcus neoformans	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Cryptococcus neoformans Cryptococcus neoformans var. neoformans	54	BED CSV CUFF SAM WIG	Brian Clifton Haynes	Dec 10, 2011
GSE33024	Sequentially acting Sox transcription factors in neural lineage development	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	27	BED CEL	Rickard Sandberg	Nov 01, 2011
GSE34304	Poised RNA Polymerase II changes over developmental time and prepares genes for future expression	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	89	BAM BED CEL	Julia Zeitlinger	Dec 20, 2012
GSE35268	Analysis of global gene expression profiles of hPAF1 deficient A549 cells	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	89	BED	ivan marazzi	Feb 15, 2012
GSE36890	Critical Role of STAT5 Transcription Factor Tetramerization for Cytokine Responses and Normal Immune Function	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	68	BED CEL TXT	Peng Li	Apr 25, 2012
GSE37562	hnRNP L-RNA in HeLa	Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	12	BED CEL	Lee-Hsueh Hung	Feb 13, 2014
GSE39528	Identification of microarray probe signals constantly present in multiple sample types	Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	9	BED	Stephen Krawetz	Jun 10, 2013
GSE39686	FMR1 targets distinct mRNA sequence elements to regulate protein expression	Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	10	BED CEL	Manuel Ascano, Jr.	Dec 13, 2012
GSE39873	LIN28 binds messenger RNAs at GGAGA motifs and regulates splicing factor abundance	Expression profiling by array Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	26	BED CEL TXT	Gene Yeo	Sep 10, 2012
GSE40476	Selective lymphoma cell killing by a PRC2 small molecule inhibitor	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	26	BED CEL CHP TDF WIG	Barbara M Bryant	Dec 01, 2020
GSE40653	Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs	Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	34	BED CEL	Gene Yeo	Sep 30, 2012