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3399 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			BED
GSE160298	The chromatin accessibility landscape of T-Cell Acute Lymphoblastic Leukemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	80	BED TXT SRA Run Selector	Junfei Zhao Zhao	Dec 11, 2024
GSE282923	Genome-wide mapping of the Galleria mellonella larvae transcription start sites during infection with the madurella mycetomatis pathogen	Expression profiling by high throughput sequencing	Galleria mellonella	72	BED RDS	Imad Abugessaisa	Dec 11, 2024
GSE251753	ETV2/ER71 regulates hematovascular lineage generation and vascularization through an H3K9 demethylase, KDM4A	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BED TXT	Donghyun Shin	Dec 10, 2024
GSE255862	The divergent role of two PRDM1 isoforms during human naïve pluripotency reprogramming	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	59	BED BW NARROWPEAK	Liping Wang	Nov 29, 2024
GSE275424	A Novel Human Protein-Coding Locus Identified Using a Targeted RNA Enrichment Technique	Expression profiling by high throughput sequencing	Homo sapiens	1	BED BEDGRAPH	Lu Tang	Nov 27, 2024
GSE282611	A multitargeting approach rewires cell identity in fusion-negative rhabdomyosarcoma [snRNAseq and scATACseq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	4	BED BIGWIG H5 MTX TSV	Maurilio Sampaolesi	Nov 27, 2024
GSE244468	The translational landscape of HIV-1 1 infected cells reveals novel gene regulatory principles	Expression profiling by high throughput sequencing Other	Homo sapiens Human immunodeficiency virus 1	42	BED CSV FA GTF RC TXT XLSX	Neva Caliskan	Nov 26, 2024
GSE249179	The Role of Mediator Subunit MED30 in Licensing the c-Myc Oncogenic Program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	34	BED BIGWIG TXT	Chunyu Jin	Nov 24, 2024
GSE236580	Adipose tissue retains an epigenetic memory of obesity after weight loss	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	135	BED MTX TSV	Adhideb Ghosh	Nov 14, 2024
GSE244832	Multi-Modal Comparison of human Hepatic Stellate Cells identifies novel therapeutic targets for Metabolic Dysfunction-Associated Steatotic Liver Disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	36	BED	David Brenner	Nov 13, 2024
GSE252152	An in vivo repertoire of zebrafish cardiomyocyte-specific cis-regulatory elements	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Danio rerio	10	BED BROADPEAK	Hieu Tri Nim	Nov 11, 2024
GSE247133	A CHD8-TRRAP axis facilitates MYC and E2F target gene regulation in human neural stem cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	21	BED BW TXT	Raymond A Poot	Nov 06, 2024
GSE242351	The role of HNRNPU and the nuclear matrix in human pluripotent stem cells	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	78	BED BW TSV	Andrew P Hutchins	Nov 05, 2024
GSE268512	Transposon and mRNA are distinguished by piRNA’s pairing and piRNA’s expression levels in Ovarian Somatic Cell.	Expression profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	33	BED BEDGRAPH BW CSV FA FASTA GTF TSV TXT	Masaru Ariura	Nov 04, 2024
GSE273685	Analysis of population heterogeneity in CHO cells by genome-wide DNA methylation analysis and by multi-modal single-cell sequencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Cricetulus griseus	35	BED	Elias Böhl	Nov 04, 2024
GSE277702	Decoding Aging in the Heart via Single Cell Dual Omics of Non-Cardiomyocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED MTX TSV	Yiran Song	Nov 01, 2024
GSE234137	m6Am sequesters PCF11 to promote full-length transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	99	BED BEDGRAPH BW	Wee Siong Sho Goh	Oct 31, 2024
GSE266308	Single-nucleus transcriptomics and chromatin accessibility of cell type-specific contributions to the epileptogenic cortex of focal cortical dysplasia type IIIa	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BED MTX TSV	Yingying Liu	Oct 30, 2024
GSE240112	Integrated single-cell analysis reveals distinct epigenetic-regulated cancer cell states and a heterogeneity-guided core signature in tamoxifen-resistant breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	16	BED CSV MTX TSV	Victor Jin	Oct 26, 2024
GSE193694	Chromatin dysfunction facilitates stem cells aging in atypical laminopathy-based progeria Mandibuloacral dysplasia type A (MAD)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	40	BED BEDGRAPH BROADPEAK BW HIC NARROWPEAK TXT	Xinyi Liu	Oct 24, 2024