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1682 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			BEDGRAPH
GSE27824	Reprogramming Transcriptional Responses through Functionally-Distinct Classes of Enhancers in Prostate Cancer Cells	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	42	BED BEDGRAPH FA	Christopher Benner	May 15, 2011
GSE29007	Human Large Airway Epithelial Cells from healthy never and current smoker and smokers with and without lung cancer	Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	21	BEDGRAPH CEL TXT	Avrum Spira	Jun 01, 2011
GSE38771	Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	BEDGRAPH CALLS PAIR TAB	Peter J Park	Jul 16, 2012
GSE44278	Redistribution of H3K27me3 upon DNA hypomethylation results in de-repression of polycomb-target genes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	35	BEDGRAPH PAIR	James P Reddington	Feb 12, 2013
GSE45715	Genome-wide analysis of BRCA1 and PALB2	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	53	BEDGRAPH WIG	Alessandro Gardini	Sep 30, 2013
GSE48007	Targeted disruption of Hotair leads to homeotic transformation and de-repression of imprinted genes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BEDGRAPH CEL	Kun Qu	Aug 21, 2013
GSE48086	Genome-scale analysis in blood progenitor and mast cells reveals how lineage-affiliated transcription factors control distinct regulatory programs	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	29	BED BEDGRAPH FPKM_TRACKING	Felicia Ng	Apr 24, 2014
GSE52658	Dynamic developmental signaling logic underlying lineage bifurcations during human endoderm induction and patterning from pluripotent stem cells	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	60	BEDGRAPH CEL TXT	Kyle M. Loh	Nov 22, 2013
GSE52937	Senataxin suppresses the antiviral transcriptional response and controls viral biogenesis	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	58	BEDGRAPH	Ivan Marazzi	Mar 30, 2015
GSE55059	Imperfect centered miRNA binding sites are common and can mediate functional repression of target mRNAs	Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	14	BEDGRAPH	Nicole Cloonan	Feb 14, 2014
GSE58255	Genome-wide analysis of the Integrator complex	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	64	BEDGRAPH BW	Alessandro Gardini	Sep 09, 2014
GSE60094	A chromatin code for alternative splicing involving an association between CTCF and HP1α proteins	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	34	BED BEDGRAPH CEL CHP TXT	Eneritz Agirre	Sep 30, 2014
GSE74250	Transcriptome analysis of diverse cell types infected with human cytomegalovirus	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens	40	BED BEDGRAPH BW CEL	Gene Yeo	Sep 17, 2016
GSE74410	Prdm1	Expression profiling by array Expression profiling by high throughput sequencing	Mus musculus	149	BEDGRAPH TXT WIG	Andrew Christopher Nelson	Mar 14, 2016
GSE80154	Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	144	BEDGRAPH CEL WIG	James Bradner	Jan 29, 2018
GSE81330	MEIS2 is a novel oncogenic partner in AML1-ETO positive AML	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	36	BEDGRAPH CEL TXT	Medhanie Assmelash Mulaw	Jul 04, 2016
GSE81602	A long noncoding RNA regulates sister chromatid cohesion	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	BEDGRAPH CEL TXT	Maite Huarte	Aug 03, 2016
GSE85942	Large-Scale Atlas of Mutant IDH1-Dependent Chromatin State Reprogramming, Reversibility, and Persistence	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens	211	BEDGRAPH CEL IDAT	Vladimir Makarov	Aug 23, 2017
GSE87637	Interaction of CNOT3 with EBF1 regulates gene-specific transcription and mRNA stability in B lymphopoiesis	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BEDGRAPH TXT	Senthilkumar Ramamoorthy	Nov 21, 2016
GSE90034	Srf destabilizes cell identity	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	41	BEDGRAPH BW CEL TXT	Takashi Ikeda	Apr 18, 2018