GEO Browser - GEO

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4270 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			BIGWIG
GSE26284	ENCODE Cold Spring Harbor Labs Long RNA-seq	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	84	BAM BB BEDRNAELEMENTS BIGWIG GFF GTF PDF SRA Run Selector	ENCODE DCC	Dec 28, 2010
GSE27221	ENCODE Genome Institute of Singapore RNA-Seq	Expression profiling by high throughput sequencing	Homo sapiens	4	BAM BIGWIG SRA Run Selector	ENCODE DCC	Feb 14, 2011
GSE29125	Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	25	BAM BIGWIG	Jacques Rougemont	Jul 01, 2011
GSE29184	A draft map of cis-regulatory sequences in the mouse genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	143	BAM BIGWIG BOWTIE TXT	Bing Ren	Jul 01, 2012
GSE29278	A draft map of cis-regulatory sequences in the mouse genome [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	19	BAM BIGWIG SRA Run Selector	Bing Ren	Jul 01, 2012
GSE30567	ENCODE Cold Spring Harbor Labs Long RNA-seq (hg19)	Expression profiling by high throughput sequencing	Homo sapiens	99	BAM BEDRNAELEMENTS BIGWIG GFF GTF PDF TXT SRA Run Selector	ENCODE DCC	Jul 13, 2011
GSE30761	Mammalian X upregulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Mus musculus Mus musculus x Mus spretus	60	BED BIGWIG CEL GFF PAIR TXT	Xinxian Deng	Jul 19, 2011
GSE30959	Control of Embryonic Stem Cell Lineage Commitment by Core Promoter Factor, TAF3	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	23	BIGWIG TXT	Devin Scannell	Sep 02, 2011
GSE31271	Control of Embryonic Stem Cell Lineage Commitment by Core Promoter Factor, TAF3 (RNA-Seq data)	Expression profiling by high throughput sequencing	Mus musculus	16	BIGWIG SRA Run Selector	Devin Scannell	Sep 02, 2011
GSE32190	Selective Functions of Individual Zinc Fingers Within the DNA-Binding Domain of Ikaros (RNA-seq: Thymocytes)	Expression profiling by high throughput sequencing	Mus musculus	7	BAM BEDGRAPH BIGWIG SAM TXT SRA Run Selector	Hilde Schjerven	Sep 08, 2013
GSE33480	RNA-seq from ENCODE/Caltech	Expression profiling by high throughput sequencing	Homo sapiens	24	BAI BAM BIGBED BIGWIG GTF TXT SRA Run Selector	ENCODE DCC	Jul 12, 2012
GSE33600	RNA Subcellular Localization by Paired End diTag Sequencing from ENCODE/GIS	Expression profiling by high throughput sequencing	Homo sapiens	31	BED BIGWIG SRA Run Selector	ENCODE DCC	Nov 10, 2011
GSE33693	Selective Functions of Individual Zinc Fingers Within the DNA-Binding Domain of Ikaros	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BAM BEDGRAPH BIGWIG SAM TXT	Hilde Schjerven	Sep 08, 2013
GSE34448	RNA Subcellular CAGE Localization from ENCODE/RIKEN	Expression profiling by high throughput sequencing	Homo sapiens	78	BED BEDRNAELEMENTS BIGWIG GTF TXT SRA Run Selector	ENCODE DCC	Dec 16, 2011
GSE35584	RNA-seq from ENCODE/HudsonAlpha	Expression profiling by high throughput sequencing	Homo sapiens	20	BIGWIG GTF TXT SRA Run Selector	ENCODE DCC	Apr 27, 2012
GSE35587	RNA-seq from ENCODE/Stanford/Yale/USC/Harvard	Expression profiling by high throughput sequencing	Homo sapiens	4	BIGWIG SRA Run Selector	ENCODE DCC	Apr 25, 2012
GSE36025	Long RNA-seq from ENCODE/Cold Spring Harbor Lab	Expression profiling by high throughput sequencing	Mus musculus	30	BAM BEDRNAELEMENTS BIGWIG TXT SRA Run Selector	ENCODE DCC	Apr 02, 2012
GSE36026	RNA-seq from ENCODE/LICR	Expression profiling by high throughput sequencing	Mus musculus	22	BIGWIG TXT SRA Run Selector	ENCODE DCC	May 10, 2012
GSE37909	RNA-seq from ENCODE/Caltech (Mouse)	Expression profiling by high throughput sequencing	Mus musculus	4	BIGWIG SRA Run Selector	ENCODE DCC	May 10, 2012
GSE38841	Selective Functions of Individual Zinc Fingers Within the DNA-Binding Domain of Ikaros (RNA-seq: BCR-ABL transformed in vitro cell culture cells)	Expression profiling by high throughput sequencing	Mus musculus	6	BIGWIG TXT SRA Run Selector	Hilde Schjerven	Sep 08, 2013