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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing				BW	Kornelia Polyak
GSE38548	Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by array Genome variation profiling by SNP array Methylation profiling by genome tiling array	Homo sapiens	106		BED BW CEL FPKM_TRACKING PROBSCOREISLAND TXT	Kornelia Polyak	Jun 09, 2015
GSE104988	KDM5B links cellular transcriptome heterogeneity to therapy resistance	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	333		BED BROADPEAK BW NARROWPEAK TSV TXT	Kornelia Polyak	Oct 03, 2018
GSE131102	Synthetic lethal and resistance interactions with BET bromodomain inhibitors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	210		BED BW NARROWPEAK TXT	Kornelia Polyak	Mar 30, 2020
GSE163397	JAK-STAT signaling in inflammatory breast cancer enables chemotherapy-resistant cell states	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	131		BW	Kornelia Polyak	Nov 02, 2022
GSE229428	Combination therapies to improve the efficacy of immunotherapy in triple-negative breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	34		BW	Kornelia Polyak	Aug 15, 2023
GSE202776	Epigenetic heterogeneity and transcriptional drivers of triple-negative breast cancer	Expression profiling by high throughput sequencing Methylation profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	386		BW IDAT NARROWPEAK	Kornelia Polyak	Nov 09, 2023
GSE237392	Loss of Kmt2c or Kmt2d drives brain metastasis via KDM6A-dependent upregulation of MMP3	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	81		BW	Kornelia Polyak	Apr 24, 2024
GSE249574	Cancer-stromal cell interactions in breast cancer brain metastases induce glycocalyx-mediated resistance to HER2-targeting therapies	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	64		BW	Kornelia Polyak	Apr 24, 2024