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1045 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			GTF
GSE240906	Transcriptome profile analyses of head kidney in roach (Rutilus rutilus), common bream (Abramis brama) and their hybrids: does infection by monogenean parasites in freshwater fish reveal differences in fish vigour among parental species and their hybrids?	Expression profiling by high throughput sequencing	Abramis brama Rutilus rutilus Rutilus rutilus x Abramis brama	90	FASTA GTF TSV	Andrea Vetešníková Šimková	Oct 01, 2023
GSE100552	Transcriptomic analysis of A. baumannii during the course of a pneumonia infection	Expression profiling by high throughput sequencing	Acinetobacter baumannii	12	GTF TSV SRA Run Selector	Jose Luis Lavin	May 23, 2018
GSE43013	Gene Expression Defines Natural Changes in Mammalian Lifespan	Expression profiling by high throughput sequencing	Acomys cahirinus Bos taurus Canis lupus familiaris Capra hircus Cavia porcellus Chlorocebus aethiops Equus caballus Erinaceus europaeus Felis catus Meles meles Meriones unguiculatus Mesocricetus auratus Murina leucogaster Mus musculus Oryctolagus cuniculus Peromyscus leucopus Petaurus breviceps Rattus norvegicus Suncus murinus Sus scrofa Tadarida brasiliensis Tamias sibiricus Ursus americanus	141	GTF TXT SRA Run Selector	Alexey Fushan	Feb 17, 2015
GSE98684	Asymmetrical changes of gene expression, small RNAs and chromatin in two resynthesized wheat allotetraploids	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Aegilops longissima Aegilops longissima x Triticum urartu Aegilops tauschii Triticum urartu Triticum urartu x Aegilops tauschii	45	FASTA FPKM_TRACKING GTF TXT SRA Run Selector	Wu Jiao	Dec 31, 2017
GSE179468	Functional characterization of the transcription programs underlying phase transition in the BSL3 pathogen Coccidioides immitis	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Agaricus bisporus Coccidioides immitis Saccharomyces cerevisiae Schizosaccharomyces pombe	27	GTF TXT SRA Run Selector	Christopher Benner	Jan 05, 2022
GSE136546	10X sequencing of immune cells and limb regenerates	Expression profiling by high throughput sequencing	Ambystoma mexicanum	4	FA GTF MTX TSV SRA Run Selector	Jeramiah James Smith	Jul 07, 2020
GSE54364	A high-resolution Amphimedon queenslandica transriptomic timecourse	Expression profiling by high throughput sequencing	Amphimedon queenslandica	59	CSV GTF SRA Run Selector	Itai Yanai	Jan 24, 2014
GSE66786	Primary duck hepatocyte transcriptome analysis provides insight into the host innate immune response and hepadnavirus infection	Expression profiling by high throughput sequencing	Anas platyrhynchos	3	FA GTF TXT SRA Run Selector	LIANG YAN	Mar 12, 2015
GSE72868	Transcriptomic analysis of Primary duck hepatocyte with differential susceptibility	Expression profiling by high throughput sequencing	Anas platyrhynchos	6	GTF TXT SRA Run Selector	LIANG YAN	Mar 09, 2016
GSE190019	RNAseq data of duck liver after feeding choline chloride	Expression profiling by high throughput sequencing	Anas platyrhynchos	28	CSV GTF SRA Run Selector	Xingzheng Li	Dec 07, 2021
GSE55453	Changes in transcript abundance for cuticular proteins and other genes three hours after a blood meal in Anopheles gambiae.	Expression profiling by high throughput sequencing	Anopheles gambiae	8	GTF SRA Run Selector	Judy Willis	Mar 01, 2014
GSE59773	Insights into the epigenomic landscape of the human malaria vector Anopheles gambiae	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anopheles gambiae	5	BED FPKM_TRACKING GTF WIG SRA Run Selector	Elena Gómez-Díaz	Sep 04, 2014
GSE99679	Mosquito-borne diseases and Omics: Tissue-restricted expression and alternative splicing revealed by transcriptome profiling of Anopheles stephensi	Expression profiling by high throughput sequencing	Anopheles stephensi	4	GTF TXT SRA Run Selector	T.S. Keshava Prasad	Jun 06, 2017
GSE196998	Mediating a host cell signaling pathway linked to the overwinter mortality offers a promising therapeutic approach for improving bee health	Expression profiling by high throughput sequencing	Apis mellifera	6	GTF TXT	Judy Chen	Dec 29, 2022
GSE76076	Conserved imprinting associated with unique epigenetic signatures in the Arabidopsis genus	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis lyrata	38	FA GTF TXT SRA Run Selector	Mary Gehring	Sep 01, 2016
GSE74721	Deciphering the cell-specific role of Arabidopsis Argonaute 3 [RNA-seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2	FPKM_TRACKING GTF SRA Run Selector	Antonin Marchais	Aug 30, 2021
GSE99805	The Nonstop decay and the RNA silencing systems operate cooperatively in plants	Expression profiling by high throughput sequencing	Arabidopsis thaliana Nicotiana benthamiana	21	GTF TXT XLSX SRA Run Selector	Daniel Silhavy	Jul 01, 2018
GSE118063	Multivalent H3K9me2 Reader ADCP1 Functions as a plant HP1 to Maintain Epigenetic Silencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	22	BW GTF SRA Run Selector	QIANWEN SUN	Nov 15, 2018
GSE133182	SME1 deficiency results in oxidative stress tolerance	Expression profiling by high throughput sequencing	Arabidopsis thaliana	6	GTF TXT SRA Run Selector	Patrick Willems	Jun 22, 2022
GSE136568	RNA-seq analysis of D-tagatose-treated Arabidopsis thaliana inoculated with Hyaloperonospora arabidopsidis isolate Noco-2	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2	FA GTF XLSX SRA Run Selector	Kazuya Akimitsu	Aug 12, 2020