272 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterExpression profiling by high throughput sequencing Remove filterHIC
GSE71831
Deletion of DXZ4 on the human inactive X chromosome eliminates superdomains and impairs gene silencing
  • Other
  • Expression profiling by high throughput sequencing
101 Miriam Huntley Jul 19, 2016
GSE82144
Myc regulates chromatin decompaction and nuclear architecture during B cell activation
258 Seolkyoung Jung Aug 10, 2017
GSE96693
Loss of CTCF reveals basic properties of post-mitotic epigenomes and induces heart failure
17 Tom Vondriska Aug 30, 2017
GSE104334
Cohesin loss eliminates all loop domains
132 Suhas Rao Oct 05, 2017
GSE104579
DNA methylation state is associated with the formation of loops and links in hematopoietic stem cells
18 Jianzhong Su Nov 24, 2017
GSE95116
The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture
28 Bo Wen Dec 03, 2017
GSE94452
Promoter-proximal CTCF binding promotes distal enhancer-dependent gene activation
174
  • Download icon HIC
Bing Ren May 01, 2018
GSE98119
The energetics and physiological impact of cohesin extrusion
352 Seolkyoung Jung May 01, 2018
GSE103477
Transcription elongation regulates genome 3D structure
253 Christopher Benner Aug 23, 2018
GSE116649
Megadomains and superloops form dynamically during X-chromosome inactivation but are dispensable for silencing and escape
65 John Edward Froberg Oct 31, 2018
GSE104341
The Peril DNA locus acts as an in vivo enhancer for distal but not proximal genes
  • Expression profiling by high throughput sequencing
  • Other
30 Abbie Groff Nov 02, 2018
GSE108869
An alternative CTCF isoform antagonizes canonical CTCF occupancy and changes chromatin architecture to promote apoptosis
30 Dipanjan Chowdhury Jan 12, 2019
GSE125540
Subtle changes in chromatin loop contact propensity are associated with differential gene regulation and expression
141 Kelly Ann Frazer Jan 24, 2019
GSE119697
Exploration of CTCF post-translation modifications uncovers Serine-224 phosphorylation by PLK1 at pericentric regions during the G2/M transition
13 Andrea June Kriz Jan 31, 2019
GSE109924
TAD cliques shape the 4-dimensional genome during dual lineage terminal differentiation
34 Philippe Collas Feb 23, 2019
GSE116876
Oncogenic Notch promotes long-range regulatory interactions within hyperconnected 3D cliques
87 YEQIAO ZHOU Feb 27, 2019
GSE107217
Xist Deletional Analysis Reveals an Interdependency between Xist RNA and Polycomb Complexes for Spreading along the Inactive X
50 Hongjae Sunwoo Mar 01, 2019
GSE115862
Antisense lncRNA transcription mediates DNA demethylation to drive stochastic Protocadherin α promoter choice
72 Daniele Canzio Apr 15, 2019
GSE129956
Functional genomics of iMEF SDHC-loss stable line
68 John Andrew Smestad Apr 22, 2019
GSE125972
A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)
38 Sylvia C Hewitt May 08, 2019