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56356 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			SRA Run Selector
GSE119440	Indole signaling at the host-microbiota-pathogen interface	Expression profiling by high throughput sequencing	Escherichia coli O157:H7	4	ASTAR TXT SRA Run Selector	Aman Kumar	Jan 05, 2019
GSE124940	The Impact of Wheat Rht-B1b Semi-Dwarfing Allele on Photosynthesis and Seed Development under Field Conditions	Expression profiling by high throughput sequencing	Triticum aestivum	24	ASTAR XLSX SRA Run Selector	Michael Giroux	Jan 11, 2019
GSE144795	The serotonin neurotransmitter modulates virulence of enteric pathogens	Expression profiling by high throughput sequencing	Escherichia coli	2	ASTAR XLSX SRA Run Selector	Aman Kumar	May 08, 2020
GSE29423	Transcriptome analysis of light-utilizing Strain IMCC1322, a member of SAR116 group bacteria	Expression profiling by high throughput sequencing	Candidatus Puniceispirillum marinum IMCC1322	6	BAI BAM SRA Run Selector	Hyun-Myung Oh	May 01, 2020
GSE31206	Colistin-resistant, lipopolysaccharide-deficient Acinetobacter baumannii responds to lipopolysaccharide loss through increased expression of genes involved in the synthesis and transport of lipoproteins, phospholipids and poly-beta-1,6-N-acetylglucosamine	Expression profiling by high throughput sequencing	Acinetobacter baumannii	4	BAI BAM TXT SRA Run Selector	Paul Francis Harrison	Aug 11, 2011
GSE33480	RNA-seq from ENCODE/Caltech	Expression profiling by high throughput sequencing	Homo sapiens	24	BAI BAM BIGBED BIGWIG GTF TXT SRA Run Selector	ENCODE DCC	Jul 12, 2012
GSE95430	Single cell RNA-seq of eight thousand epithelium cells from the mammary glands of adult mice	Expression profiling by high throughput sequencing	Mus musculus	2	BAI MTX TSV SRA Run Selector	Gordon K Smyth	Nov 20, 2017
GSE147440	Identification of m6A residues at single nucleotide resolution using eCLIP and an accessible custom analysis pipeline	Expression profiling by high throughput sequencing	Homo sapiens	17	BAI BAM BED XLS SRA Run Selector	Justin Roberts	Dec 31, 2020
GSE184161	test1	Expression profiling by high throughput sequencing	Mus musculus	1	BALLC BCI SRA Run Selector	Pierre X Ledoux	Sep 28, 2021
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE20156	RNA-Seq of melanoma short-term cultures and cell lines	Expression profiling by high throughput sequencing	Homo sapiens	14	BAM SRA Run Selector	Michael Berger	Feb 04, 2010
GSE21977	De novo transcriptome sequencing in Anopheles funestus using Illumina RNA-seq technology	Expression profiling by high throughput sequencing Other	Anopheles funestus	1	BAM SRA Run Selector	Jacob Crawford	Dec 01, 2010
GSE24012	Transcriptional profiling of EJC depletion by RNA-Seq using the SOLiD platform (Applied Biosystems)	Expression profiling by high throughput sequencing	Drosophila melanogaster	6	BAM TXT WIG SRA Run Selector	Hugo Lavoie	Oct 20, 2010
GSE24958	Transcriptome-wide sequencing reveals numerous APOBEC1 mRNA editing targets in transcript 3'UTRs	Expression profiling by high throughput sequencing	Mus musculus	2	BAM SRA Run Selector	Brad Rosenberg	Jan 23, 2011
GSE25183	Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression (RNA-Seq data)	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	58	BAM SRA Run Selector	Matthew Iyer	Aug 02, 2011
GSE26284	ENCODE Cold Spring Harbor Labs Long RNA-seq	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	84	BAM BB BEDRNAELEMENTS BIGWIG GFF GTF PDF SRA Run Selector	ENCODE DCC	Dec 28, 2010
GSE26633	Transcriptional Regulation of Anabaena 7120 response to Nitrogen Deprivation	Expression profiling by high throughput sequencing	Nostoc sp. PCC 7120 = FACHB-418	4	BAM SRA Run Selector	James W Golden	Jun 22, 2011
GSE26811	Transcriptomics of a novel trophoblast differentiation protocol applied to human embryonic stem cells	Expression profiling by high throughput sequencing	Homo sapiens	5	BAM SRA Run Selector	Paul Robson	May 01, 2014