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16838 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			TSV
GSE15780	Interplay between c-Jun and TAp73α/β contributes to the apoptosis-survival balance	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	15	BED TSV TXT SRA Run Selector	Marion Lohrum	Mar 01, 2011
GSE17064	Genome-wide identification of Polycomb-associated RNAs by RIP-seq	Expression profiling by high throughput sequencing	Mus musculus	7	TSV SRA Run Selector	Mark L Borowsky	Dec 22, 2010
GSE17403	Multiple platform assessment of the EGF dependent transcriptome by microarray and deep tag sequencing analysis	Expression profiling by array Genome variation profiling by genome tiling array Expression profiling by high throughput sequencing	Homo sapiens	60	FA GPR TSV TXT SRA Run Selector	Lauro Sumoy	Jul 18, 2011
GSE26439	The tumor antigen PRAME is a substrate recognition subunit of a Cul2-based ubiquitin ligase and is associated with active NFY promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	5	BED TSV WIG SRA Run Selector	H.G. Stunnenberg	Jul 29, 2011
GSE27243	A Transcriptomic Atlas of Mouse Neocortical Layers	Expression profiling by high throughput sequencing	Mus musculus	19	BAM GTF TSV WIG SRA Run Selector	T Grant Belgard	Aug 24, 2011
GSE27463	Global Analysis of the Immediate Transcriptional Effects of Estrogen Signaling Reveals a Rapid, Extensive, and Transient Response	Expression profiling by high throughput sequencing	Homo sapiens	8	BED TSV SRA Run Selector	W. Lee Kraus	May 06, 2011
GSE30970	Arabidopsis AGO5 contributes to a POL II-based RNA silencing pathway directing epigenetic marks	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	7	TSV SRA Run Selector	Krys Kelly	Jul 27, 2014
GSE35213	T-cell factor 4 and β-catenin chromatin occupancies pattern zonal liver metabolism.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED TSV SRA Run Selector	Philippe Veber	Jan 18, 2014
GSE37933	Coordinated regulation of neuronal mRNA steady-state levels through developmentally controlled intron retention	Expression profiling by high throughput sequencing	Mus musculus	3	TSV SRA Run Selector	Brad A Friedman	Jul 12, 2012
GSE39522	Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	2	TSV WIG SRA Run Selector	Sebastien Vigneau	Oct 11, 2013
GSE39523	Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED TSV WIG	Sebastien Vigneau	Oct 11, 2013
GSE40740	Genome wide co-localization of Polycomb orthologs and their effects on gene expression in human fibroblasts	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	27	BED TSV WIG SRA Run Selector	Gordon Peters	Dec 19, 2013
GSE40948	Genome-wide nucleosome positioning during embryonic stem cell development [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	5	BED TSV SRA Run Selector	Vladimir B Teif	Oct 21, 2012
GSE41222	Deciphering the genetics of mammalian limb growth	Expression profiling by high throughput sequencing	Mus musculus	4	TSV SRA Run Selector	Pedro Coutinho	Jan 01, 2014
GSE41323	Signaling Pathways Deferentially Affect RNA Polymerase II Initiation, Pausing, and Elongation in Human Cells: TNF-alpha dependent signaling in AC16 cells	Expression profiling by high throughput sequencing	Homo sapiens	6	BED TSV TXT SRA Run Selector	W. Lee Kraus	Apr 10, 2013
GSE41324	Signaling Pathways Deferentially Affect RNA Polymerase II Initiation, Pausing, and Elongation in Human Cells: Estrogen dependent signaling in MCF-7 cells	Expression profiling by high throughput sequencing	Homo sapiens	11	BED TSV TXT SRA Run Selector	W. Lee Kraus	Apr 10, 2013
GSE41753	Single-base resolution DNA methylomes of soybean recombinant inbred lines reveals heritability patterns of natural methylation variants	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Glycine max	97	TSV TXT SRA Run Selector	Joseph R Ecker	Jun 04, 2013
GSE42474	Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes [ChIP-Seq and RNA-seq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	9	TSV WIG SRA Run Selector	Richard A Young	Jan 02, 2013
GSE42846	Marker gene discovery for Staphylococcus epidermidis infection in zebrafish embryos (RNA-Seq)	Expression profiling by high throughput sequencing	Danio rerio	8	TSV SRA Run Selector	Wouter Veneman	Apr 01, 2013
GSE42847	Marker gene discovery for Staphylococcus epidermidis infection in zebrafish embryos	Expression profiling by high throughput sequencing	Danio rerio	36	TSV TXT	Wouter Veneman	Apr 01, 2013