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16308 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			TSV
GSE240906	Transcriptome profile analyses of head kidney in roach (Rutilus rutilus), common bream (Abramis brama) and their hybrids: does infection by monogenean parasites in freshwater fish reveal differences in fish vigour among parental species and their hybrids?	Expression profiling by high throughput sequencing	Abramis brama Rutilus rutilus Rutilus rutilus x Abramis brama	90	FASTA GTF TSV	Andrea Vetešníková Šimková	Oct 01, 2023
GSE262802	Acanthamoeba castellanii as a model for unveiling Campylobacter jejuni host-pathogen dynamics	Expression profiling by high throughput sequencing	Acanthamoeba castellanii	6	FNA TSV	Fauzy Nasher	Jun 28, 2024
GSE85110	TSS-EMOTE, a refined protocol for a more complete and less biased global mapping of transcription start sites in bacterial pathogens.	Expression profiling by high throughput sequencing Other	Acinetobacter baumannii Klebsiella aerogenes Staphylococcus aureus Staphylococcus epidermidis	30	TSV SRA Run Selector	Julien Prados	Oct 15, 2016
GSE100552	Transcriptomic analysis of A. baumannii during the course of a pneumonia infection	Expression profiling by high throughput sequencing	Acinetobacter baumannii	12	GTF TSV SRA Run Selector	Jose Luis Lavin	May 23, 2018
GSE110207	Relationship between tolerance and persistence mechanisms in Acinetobacter baumannii strains with AbkAB Toxin-Antitoxin system	Expression profiling by high throughput sequencing	Acinetobacter baumannii	8	CSV FASTA TSV TXT XLS SRA Run Selector	Maria Tomas-Carmona	Feb 09, 2018
GSE131949	Human pleural fluid elicits pyruvate and phenylalanine metabolism in Acinetobacter baumannii to enhance cytotoxicity and immune evasion	Expression profiling by high throughput sequencing	Acinetobacter baumannii	8	FASTA TSV TXT SRA Run Selector	M. S. Ramirez	May 31, 2019
GSE148264	Changes in relative transcript amounts caused by hydrogen sulfide treatment, deletion of BigR, and BigR mutant complement in Acinetobacter baumannii	Expression profiling by high throughput sequencing	Acinetobacter baumannii	12	TSV SRA Run Selector	David Peter Giedroc	Jun 15, 2020
GSE167117	Pleural fluid and Human Serum albumin modulate the behavior of a hypervirulent and Multidrug-resistant (MDR) Acinetobacter baumannii representative strain	Expression profiling by high throughput sequencing	Acinetobacter baumannii	12	TSV SRA Run Selector	M. S. Ramirez	Apr 28, 2021
GSE169081	DksA acts as a transcriptional switch in stress and virulence in Acinetobacter baumannii	Expression profiling by high throughput sequencing	Acinetobacter baumannii	24	TSV SRA Run Selector	Lars Barquist	Sep 13, 2022
GSE199706	Alteration of global transcription by the artificial sweetener acesulfame K in Acinetobacter baumannii AB5075	Expression profiling by high throughput sequencing	Acinetobacter baumannii AB5075	6	TSV	Rubén de Dios	Oct 27, 2022
GSE212989	Alteration of global transcription by the phytochemical Kaempferol in Acinetobacter baumannii AB5075	Expression profiling by high throughput sequencing	Acinetobacter baumannii AB5075	6	TSV	Rubén de Dios	Sep 20, 2023
GSE250425	Transcription regulation by CavA cyclase in Acinetobacter baumannii AB5075	Expression profiling by high throughput sequencing	Acinetobacter baumannii AB5075	6	TSV	Lyuboslava Harkova	Aug 30, 2024
GSE214305	Deep learning-guided discovery of a narrow-spectrum antibiotic against Acinetobacter baumannii	Expression profiling by high throughput sequencing	Acinetobacter baumannii ATCC 17978	7	CSV TSV	Gary Liu	Feb 01, 2023
GSE182141	A subset of pro-inflammatory spiny mice macrophages promotes a regenerative phenotype in mouse fibroblasts	Expression profiling by high throughput sequencing	Acomys cahirinus Mus musculus	10	MTX TSV SRA Run Selector	Steve Potter	Oct 23, 2023
GSE216723	Injured Mus and Acomys ear tissues at day0 were analyzed using 10X single-cell rna-seq	Expression profiling by high throughput sequencing	Acomys cahirinus Mus musculus	2	MTX TSV	Steve Potter	Jan 23, 2023
GSE160740	Single-cell RNA sequencing identifies cells exhibiting sexually dimorphic gene expression in the brain of the mosquito, Aedes aegypti	Expression profiling by high throughput sequencing	Aedes aegypti	2	MTX TSV SRA Run Selector	Susanta K. Behura	Feb 11, 2022
GSE205498	Transcriptomic evolution across bilaterian tissues	Expression profiling by high throughput sequencing	Aedes aegypti Blattella germanica Bombyx mori Branchiostoma lanceolatum Callorhinchus milii Cloeon dipterum Danio rerio Drosophila melanogaster Episyrphus balteatus Monodelphis domestica Octopus bimaculoides Strigamia maritima Strongylocentrotus purpuratus Tribolium castaneum Xenopus tropicalis	89	TSV	Federica Mantica	Oct 12, 2022
GSE245622	A cell atlas of the adult Aedes aegypti midgut revealed by single nucleus RNA-Seq	Expression profiling by high throughput sequencing	Aedes aegypti	2	MTX TSV	Alexander W.E. Franz	Oct 17, 2023
GSE246612	A cell atlas of the adult female Aedes aegypti midgut revealed by single-cell RNA sequencing	Expression profiling by high throughput sequencing	Aedes aegypti	2	MTX TSV	Han Xia	Nov 17, 2023
GSE267972	Gene expression level in Aedes aegypti midgut four days post blood fed or Zika virus infection in single cell level	Expression profiling by high throughput sequencing	Aedes aegypti	2	MTX TSV	Tse-Yu Chen	Jul 29, 2024