GEO Browser - GEO

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112 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Mus musculus		BROADPEAK
GSE222347	Loss of PBAF Promotes Effector Differentiation and Limits CD8+ T Cell Exhaustion in Chronic Viral Infection and Cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	6	BIGWIG BROADPEAK H5 TSV	Weiguo Cui	Jun 24, 2023
GSE159257	Zeb1-knockdown retina endothelial cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BROADPEAK	Qing Cissy Yu	Oct 08, 2023
GSE141961	Polycomb-mediated repression of EphrinA5 promotes growth and invasion of glioblastoma	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	9	BROADPEAK TAB SRA Run Selector	Silvia Marino	Feb 01, 2020
GSE183090	Inheritance of Repressed Chromatin Domains during S-phase Requires the Histone Chaperone NPM1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BIGWIG BROADPEAK TXT SRA Run Selector	sanxiong liu	Apr 27, 2022
GSE184499	Co-existing TP53 and ARID1A mutations promote aggressive endometrial tumorigenesis	Expression profiling by high throughput sequencing Other	Mus musculus	10	BROADPEAK TAB	Ronald L. Chandler	Dec 13, 2021
GSE106956	In vivo nuclear capture and molecular profiling identifies Gmeb1 as a transcriptional regulator essential for dopamine neuron function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BROADPEAK TXT SRA Run Selector	Mohamed Nadhir Djekidel	May 14, 2019
GSE108917	LncRNAs and open chromatin regions constitute midbrain dopaminergic neuron- specific molecular signatures	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	11	BROADPEAK XLSX SRA Run Selector	Philippe Ravassard	Jan 09, 2019
GSE114451	Genetic analyses reveal the signaling and transcriptional mechanisms of stomach stromal stem cell niches.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BROADPEAK NARROWPEAK TXT	Tae-Hee Kim	Dec 14, 2019
GSE172161	GRHL3 activates FSCN1 to relax cell adhesions between migrating keratinocytes in the wound front	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BROADPEAK TXT SRA Run Selector	Ghaidaa Kashgari	Oct 13, 2021
GSE182174	The age of the bone marrow microenvironment influences B-cell acute lymphoblastic leukemia progression via CXCR5-CXCL13	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BROADPEAK	Mark Hartmann	Aug 24, 2021
GSE247130	CEBPA restricts alveolar type 2 cell plasticity during development and injury-repair [1]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BROADPEAK CLOUPE H5 RDS TBI TSV	Dalia Hassan	Apr 18, 2024
GSE108804	Genome-wide chromatin accessibility and transcriptome profiling shows that minimal epigenome changes lead to coordinated transcriptional dysregulation of hedgehog signaling in Danforth’s short tail mice	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	14	BED BROADPEAK BW TXT	Stephen C.J. Parker	Oct 31, 2018
GSE117626	Chromatin accessibility and transcriptomic profiling in NMe Gata-site double mutant mouse DN3 Thymocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BEDGRAPH BROADPEAK BW	Stuart Aidan Quinn	Aug 01, 2019
GSE125516	Macrophage training to Borrelia burgdorferi governs cardiac inflammation in the mammalian host	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BROADPEAK	Jose Luis Lavin	Jan 21, 2021
GSE152663	SWI/SNF inactivation in the endometrial epithelium leads to loss of epithelial integrity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16	BROADPEAK TAB	Ronald L. Chandler	Oct 20, 2020
GSE211864	Probing cell identity hierarchies by fate titration and collision during direct reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG BROADPEAK H5 LOOM TSV	Bob Hersbach	Sep 16, 2022
GSE116921	Enhancer Reprogramming Confers Dependence on Glycolysis and IGF signaling in KMT2D Mutant Melanoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BED BROADPEAK BW TXT	Mahinur Mattohti	Nov 16, 2020
GSE129691	Setd2 deficiency impaired erythroid differentiation and accelerated Myelodysplastic Syndrome(MDS) - associated leukemogenesis through S100A8 and S100A9	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BED BROADPEAK BW COV TXT XLSX SRA Run Selector	Jiaying Zhang	Jul 02, 2020
GSE151366	The TFIID subunit TAF4 is required for pancreatic beta cell function and identity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BROADPEAK TSV	Irwin Davidson	Jun 01, 2021
GSE173533	GFI1 tethers the nucleosome-remodeling and histone-deacetylase (NuRD) complex to open and transcriptionally active chromatin in myeloid progenitors	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	18	BROADPEAK CSV NARROWPEAK SRA Run Selector	Tarik Moroy	Oct 13, 2021