GEO Browser - GEO

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266 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Mus musculus		CEL
GSE34304	Poised RNA Polymerase II changes over developmental time and prepares genes for future expression	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	89	BAM BED CEL	Julia Zeitlinger	Dec 20, 2012
GSE45242	HoxD locus	Other Genome binding/occupancy profiling by genome tiling array Expression profiling by genome tiling array Expression profiling by high throughput sequencing	Atelerix albiventris Mus musculus	32	BAR BED BEDGRAPH BW CEL	Marion LELEU	Oct 23, 2013
GSE62269	Convergent evolution of complex regulatory landscapes and pleiotropy at Hox loci	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by genome tiling array	Mus musculus	10	BAR BEDGRAPH BW CEL	Nicolas Lonfat	Nov 21, 2014
GSE28500	Genome-wide Regulation of 5hmC, 5mC and Gene Expression by Tet1 Hydroxylase in Mouse Embryonic Stem Cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	23	BED CEL	Feizhen Wu	Apr 21, 2011
GSE30761	Mammalian X upregulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Mus musculus Mus musculus x Mus spretus	60	BED BIGWIG CEL GFF PAIR TXT	Xinxian Deng	Jul 19, 2011
GSE32120	The little elongation complex (LEC) regulates small nuclear RNA transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Drosophila melanogaster Mus musculus	22	BED CEL SRA Run Selector	Alexander (Garrett) Garruss	Dec 22, 2011
GSE33024	Sequentially acting Sox transcription factors in neural lineage development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	27	BED CEL	Rickard Sandberg	Nov 01, 2011
GSE33923	2C::tomato ES cells, 2-cell embryos and wild type oocytes	Expression profiling by high throughput sequencing	Mus musculus	16	BED CEL	Todd Macfarlan	Jun 18, 2012
GSE36890	Critical Role of STAT5 Transcription Factor Tetramerization for Cytokine Responses and Normal Immune Function	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	68	BED CEL TXT	Peng Li	Apr 25, 2012
GSE40653	Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs	Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	34	BED CEL	Gene Yeo	Sep 30, 2012
GSE41457	Histone H3K9 Methyltransferase G9a Represses PPARγ Expression and Adipogenesis	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	12	BED CEL	Kai Ge	Feb 01, 2013
GSE44163	Let-7 represses Nr6a1 and a mid-gestation developmental program in adult fibroblasts	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Other	Mus musculus	52	BED BW CEL TXT	A Bhutkar	Apr 10, 2013
GSE46545	The Histone H3 Lysine 9 Methyltransferases G9a and GLP Regulate Polycomb Repressive Complex 2-Mediated Gene Silencing	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	26	BED CEL	PONTIS Julien	Jan 03, 2014
GSE56747	Antidiabetic Rosiglitazone Remodels the Adipocyte Transcriptome by Redistributing Transcription to PPARg-Driven Enhancers	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BED CEL	Hee-Woong Lim	May 02, 2014
GSE65491	Regulatory RNA Apela Is a Component of a Negative Feedback Loop Regulating p53-Mediated Apoptosis in Embryonic Stem Cells	Expression profiling by high throughput sequencing Expression profiling by array Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BED CEL TXT XLS	Jing Huang	Jun 05, 2015
GSE67755	Chronic haloperidol effects on gene expression and chromatin accessibility in mouse brain	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	87	BED BW CEL GTF	Yunjung Kim	Apr 10, 2016
GSE70729	Role of the histone demethylase KDM2B in hematopoietic homeostasis and malignancies	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	40	BED CEL CHP	Alexandros Tzatsos	Feb 22, 2016
GSE73825	Spatial interplay between Polycomb and Trithorax complexes controls transcriptional activity in T lymphocytes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	59	BED CEL TXT	Atsushi Onodera	Oct 10, 2015
GSE77707	Distinct and shared functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses	Expression profiling by array Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	48	BED CEL CSV WIG	Gene Yeo	Jul 05, 2016
GSE84131	CHD7 and Runx1 interaction provides a braking mechanism for hematopoietic differentiation	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	33	BED CEL NARROWPEAK	Leonard Zon	Jan 01, 2023