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22118 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Mus musculus		SRA Run Selector
GSE32120	The little elongation complex (LEC) regulates small nuclear RNA transcription	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	22	BED CEL SRA Run Selector	Alexander (Garrett) Garruss	Dec 22, 2011
GSE33252	Chromatin based modeling of transcription rates identifies the contribution of different regulatory layers to steady-state mRNA levels	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	51	CEL WIG SRA Run Selector	Dirk Schuebeler	Jul 23, 2012
GSE108553	Genome-wide transcriptional profiles of Kupffer cells and alveolar macrophages from naïve and LPS-injected mice	Expression profiling by array Expression profiling by high throughput sequencing	Mus musculus	18	TXT SRA Run Selector	Daun Jung	Dec 27, 2018
GSE11724	Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	TXT SRA Run Selector	Whitehead Institute	Jul 30, 2008
GSE17064	Genome-wide identification of Polycomb-associated RNAs by RIP-seq	Expression profiling by high throughput sequencing	Mus musculus	7	TSV SRA Run Selector	Mark L Borowsky	Dec 22, 2010
GSE18245	Elucidating the stromal expression pattern in response to tumor-derived Shh	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	4	TXT SRA Run Selector	henk roelink	Sep 24, 2010
GSE19473	The integrative analysis of microRNA and mRNA expression in mouse uterus under delayed implantation and activation	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	4	SRA Run Selector	Zeng-Ming Yang	Dec 15, 2009
GSE20846	Transcript assembly and abundance estimation from RNA-Seq reveals thousands of new transcripts and switching among isoforms	Expression profiling by high throughput sequencing	Mus musculus	4	GTF SAM SRA Run Selector	Cole Trapnell	Apr 14, 2010
GSE20851	Ab initio reconstruction of transcriptomes of pluripotent and lineage committed cells reveals gene structures of thousands of lincRNAs	Expression profiling by high throughput sequencing	Mus musculus	3	SAM SRA Run Selector	Mitchell Guttman	May 01, 2010
GSE20898	Genome-wide Analyses of Transcription Factor GATA3-Mediated Gene Regulation in Distinct T Cell Types	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH RPKM SRA Run Selector	Brian J Abraham	Aug 26, 2011
GSE21161	Widespread transcription at neuronal activity-regulated enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	48	BEDGRAPH BW SRA Run Selector	jesse M gray	Apr 15, 2010
GSE21180	Characterization of the single-cell transcriptional landscape by highly multiplex RNA-Seq	Expression profiling by high throughput sequencing	Mus musculus	5	TAB TXT WIG SRA Run Selector	Sten Linnarsson	Sep 21, 2010
GSE21580	DeepCAGE and DeepSAGE with proliferating and differentiated C2C12 mouse myoblasts	Expression profiling by high throughput sequencing	Mus musculus	14	WIG SRA Run Selector	Peter A.C. 't Hoen	Jul 06, 2010
GSE21699	Architectural complexity of the polyadenylated intestinal transcriptome revealed by hybrid RNA sequencing	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Robert Haesler	Jan 06, 2011
GSE21860	RNA-seq of pancreatic islets isolated from normal female and pregnant female mice	Expression profiling by high throughput sequencing	Mus musculus	6	TXT SRA Run Selector	Hail Kim	Jul 02, 2010
GSE21975	Diverse endonucleolytic cleavage sites in the mammalian transcriptome depend upon microRNAs, Drosha, and additional nucleases	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	27	SRA Run Selector	Fedor Karginov	Jun 25, 2010
GSE21993	Deletion of Tardbp Down-Regulates Tbc1d1, a Gene Linked to Obesity, and Alters Body Fat Metabolism	Expression profiling by high throughput sequencing	Mus musculus	5	TXT SRA Run Selector	Jonathan Ling	Jul 15, 2010
GSE22001	Analysis of mir-223 knockout cultured neutrophils versus wild-type cultured neutrophils, by ribosome profiling and mRNA-Seq	Expression profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Huili Guo	Aug 03, 2010
GSE22111	The Atoh1 targetome in murine postnatal cerebellum	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	Yuanxin Xi	Feb 08, 2011
GSE22131	High resolution analysis of genomic imprinting in the embryonic and adult mouse brain AND Sex-specific imprinting in the mouse brain	Expression profiling by high throughput sequencing	Mus musculus	32	CSV TXT SRA Run Selector	Catherine Dulac	Jul 08, 2010