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582 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Mus musculus		TAB
GSE35857	Essential role of EBF1 in B cell immunity by controlling the generation and function of distinct mature B cell types	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	29	BED TAB SRA Run Selector	Meinrad Busslinger	Mar 20, 2012
GSE38148	The RNA Pol II Elongation Factor Ell3 Marks Enhancers in ES Cells and Primes Future Gene Activation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED TAB SRA Run Selector	Alexander (Garrett) Garruss	Dec 30, 2012
GSE62063	B cell super-enhancers and regulatory clusters recruit AID tumorigenic activity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	76	BED BW TAB WIG SRA Run Selector	Marei Dose	Dec 04, 2014
GSE67299	Frequent and Transient Acquisition of Pluripotency During Somatic Cell Trans-Differentiation with iPSCs Reprogramming Factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	15	BED TAB	Noa Novershtern	Apr 30, 2015
GSE78040	Reversible methylation of m6Am in the 5′ cap controls mRNA stability	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	28	BED TAB TXT SRA Run Selector	Jan Mauer	Dec 21, 2016
GSE102518	High-Resolution Dissection of Conducive Somatic Cell Reprogramming to Naïve Ground State Pluripotency in Mbd3/NuRD and Gatad2a/NuRD Depleted Systems	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	243	BED TAB TXT	Noa Novershtern	Jul 15, 2018
GSE109740	Transcription-associated histone pruning demarcates macroH2A chromatin domains	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	18	BED BIGWIG DIFF TAB SRA Run Selector	Emily Bernstein	Oct 05, 2018
GSE121459	Myc and Dnmt1 impede the pluripotent to totipotent state transition in embryonic stem cell	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	40	BED CSV TAB	Mohamed Nadhir Djekidel	Apr 12, 2019
GSE129958	Shox2 regulates osteogenesis and patterns the hard palate during palatogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BED BIGWIG TAB	Jue Xu	Oct 23, 2019
GSE133244	Single-Cell Chromatin Accessibility Maps Reveal the Regulatory Programs Driving Early Mouse Organogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED BW MTX TAB TXT SRA Run Selector	Bertie Gottgens	Feb 05, 2020
GSE160328	RNMT regulates the CD4 T cell transcriptome and translatome	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	46	BED BEDGRAPH TAB	Alison Galloway	May 13, 2021
GSE183619	BAF complex cooperates with c-Myc to orchestrate early fate decisions of CD8 T cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	101	BED BIGWIG CEL TAB	Douglas R Green	Apr 24, 2022
GSE198285	Cohesin maintains replication timing to suppress DNA damage on cancer genes	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	170	BED BEDGRAPH BW TAB	Jinchun Wu	May 17, 2023
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE218649	Age-associated changes in murine endothelial gene expression and chromatin accessibility correlate with impaired blood-brain barrier integrity and elevated risk of intracerebral hemorrhage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	79	BED TAB	Gilles Gasparoni	Sep 20, 2023
GSE218958	Regulation of IkB kinase family crosstalk by an N4BP1-caspase-8 axis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	111	BED MTX TAB	Rohit Reja	Apr 01, 2024
GSE231307	CpG island turnover is associated with evolutionary changes in enhancer activity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	76	BED BW TAB	James P. Noonan	May 10, 2023
GSE235624	MERTK inhibition for the treatment of tissue fibrosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	154	BED BEDGRAPH BIGWIG BW CLOUPE CSV H5 TAB TBI TSV	Ziyan Pan	Mar 05, 2024
GSE247083	Lysosomal catabolic activity governs the exit of the murine totipotent 2-cell state by silencing early-embryonic retrotransposons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BED TAB	hao wu	Aug 25, 2024
GSE107644	Single-cell RNA-seq Uncovers Dynamic Processes and Critical Regulators in Mouse Spermatogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	106	BEDGRAPH TAB TXT SRA Run Selector	Yuxuan Zheng	Aug 01, 2018