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20581 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Mus musculus		TXT
GSE41338	The evolutionary landscape of alternative splicing in vertebrate species	Expression profiling by high throughput sequencing	Xenopus tropicalis Tetraodon nigroviridis Mus musculus Gallus gallus Anolis carolinensis	21	BW TXT SRA Run Selector	Nuno L Barbosa-Morais	Dec 22, 2012
GSE43520	The evolution of lncRNA repertoires and expression patterns in tetrapods	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Xenopus tropicalis Ornithorhynchus anatinus Mus musculus Monodelphis domestica Macaca mulatta Homo sapiens Gorilla gorilla Gallus gallus	55	BEDGRAPH TXT SRA Run Selector	Anamaria Necsulea	Jan 19, 2014
GSE68087	Active DNA demethylation at enhancers during the vertebrate phylotypic period	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Xenopus tropicalis Mus musculus Danio rerio	30	BED TXT SRA Run Selector	Ozren Bogdanovic	Jan 29, 2016
GSE97367	BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage (Gene expression profiling in several tetrapod species, bulk tissue RNA-seq)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Xenopus tropicalis Ornithorhynchus anatinus Mus musculus Monodelphis domestica Homo sapiens Gallus gallus Anolis carolinensis	197	BW TXT	Diego Cortez	Oct 27, 2017
GSE39673	Geminin regulates the transcriptional and epigenetic status of neuronal fate promoting genes during mammalian neurogenesis	Expression profiling by high throughput sequencing Expression profiling by array	Xenopus laevis Mus musculus	10	CEL TXT	Kristen L Kroll	Dec 06, 2012
GSE52809	Poly(A)-tail profiling reveals an embryonic switch in translational control	Expression profiling by high throughput sequencing	Xenopus laevis Schizosaccharomyces pombe Saccharomyces cerevisiae Mus musculus Homo sapiens Drosophila melanogaster Danio rerio Arabidopsis thaliana	64	TXT SRA Run Selector	Stephen Eichhorn	Jan 29, 2014
GSE87872	Gene resistance to transcriptional reprogramming following nuclear transfer is directly mediated by multiple chromatin repressive pathways	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Xenopus laevis Mus musculus	48	BW TXT SRA Run Selector	Charles Bradshaw	Jun 12, 2017
GSE166544	The molecular basis of coupling between poly(A)-tail length and translational efficiency	Expression profiling by high throughput sequencing Other	Xenopus laevis Mus musculus Homo sapiens	79	TXT SRA Run Selector	David Bartel	Jul 07, 2021
GSE58388	Contribution of Veillonella parvula to Pseudomonas aeruginosa mediated pathogenicity in a murine tumor model system	Expression profiling by high throughput sequencing	Veillonella parvula DSM 2008 Pseudomonas aeruginosa PA14 Mus musculus	12	TXT SRA Run Selector	Denitsa Eckweiler	Nov 06, 2014
GSE43013	Gene Expression Defines Natural Changes in Mammalian Lifespan	Expression profiling by high throughput sequencing	Ursus americanus Tamias sibiricus Tadarida brasiliensis Sus scrofa Suncus murinus Rattus norvegicus Petaurus breviceps Peromyscus leucopus Oryctolagus cuniculus Mus musculus Murina leucogaster Mesocricetus auratus Meriones unguiculatus Meles meles Felis catus Erinaceus europaeus Equus caballus Chlorocebus aethiops Cavia porcellus Capra hircus Canis lupus familiaris Bos taurus Acomys cahirinus	141	GTF TXT SRA Run Selector	Alexey Fushan	Feb 17, 2015
GSE77213	High-throughput functional comparison of promoter and enhancer activities	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	unidentified plasmid Mus musculus	60	TXT XLS XLSX SRA Run Selector	Thomas Andy Nguyen	May 23, 2016
GSE150858	Barcoded viral tracing of single-cell interactions in CNS inflammation	Other Expression profiling by high throughput sequencing	unidentified plasmid Suid alphaherpesvirus 1 Mus musculus	128	CSV TAR TSV TXT ZIP	Michael Wheeler	Apr 22, 2021
GSE193472	Optocoder: computational decoding of spatially indexed bead arrays	Expression profiling by high throughput sequencing	unidentified Mus musculus	4	TXT	Nikos Karaiskos	Jun 24, 2022
GSE112388	Bilophila wadsworthia worsens high-fat diet-induced metabolic impairments in inflammation dependent and independent manners	Expression profiling by array Expression profiling by high throughput sequencing	uncultured bacterium Mus musculus	56	TXT	Phuong Hang PHAM	May 26, 2018
GSE65980	Toxoplasma proteins GRA17 and GRA23 mediate the movement of small molecules between the host and the parasitophorous vacuole.	Expression profiling by high throughput sequencing	Toxoplasma gondii RH Mus musculus	4	TXT SRA Run Selector	Daniel A Gold	May 01, 2015
GSE190756	Comparative transcriptomics reveals circadian and pluripotency networks as two pillars of longevity regulation	Expression profiling by high throughput sequencing	Tamiasciurus hudsonicus Tamias striatus Sciurus carolinensis Scalopus aquaticus Rattus rattus Peromyscus maniculatus Ondatra zibethicus Octodon degus Neotoma cinerea Myocastor coypus Mus musculus Mesocricetus auratus Marmota monax Hydrochoerus hydrochaeris Heterocephalus glaber Fukomys damarensis Ellobius lutescens Cuniculus paca Cricetulus barabensis Condylura cristata Chinchilla lanigera Cavia porcellus Castor canadensis Blarina brevicauda Acomys russatus	522	TXT SRA Run Selector	jinlong lu	May 18, 2022
GSE219025	Co-option of the transcription factor SALL1 in mole ovotestis formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Talpa occidentalis Mus musculus	37	TXT	Francisca Martinez Real	Nov 29, 2022
GSE68247	Massively parallel cis-regulatory analysis in the mammalian central nervous system	Expression profiling by high throughput sequencing Other	Synthetic plasmid Mus musculus	4	TXT SRA Run Selector	Joseph C Corbo	Oct 15, 2015
GSE57063	Tet enzymes are essential for embryogenesis and completion of embryonic genome activation	Expression profiling by high throughput sequencing	synthetic construct Mus musculus	48	TXT SRA Run Selector	Julia Arand	Nov 22, 2021
GSE58652	Tn5 transposase and tagmentation procedures for massively scaled sequencing projects	Expression profiling by high throughput sequencing	synthetic construct Mus musculus Homo sapiens	67	TXT SRA Run Selector	Rickard Sandberg	Jul 14, 2014