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13 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Arabidopsis thaliana				Hume Stroud
GSE34840	Genome-wide analysis of histone H3.1 and H3.3 variants in Arabidopsis thaliana	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	5		TXT SRA Run Selector	Hume Stroud	Mar 05, 2012
GSE37075	Loss of the DNA methyltransferase MET1 induces H3K9 hypermethylation at PcG target genes in Arabidopsis, and relocation of H3K27 trimethylation to transposons	Genome binding/occupancy profiling by genome tiling array Expression profiling by high throughput sequencing	Arabidopsis thaliana	8		PAIR WIG	Hume Stroud	Mar 02, 2013
GSE38286	DNA methyltransferases are required to induce heterochromatic re-replication in Arabidopsis.	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	43		TXT SRA Run Selector	Hume Stroud	Aug 07, 2012
GSE39405	The SET-domain protein SUVR5 mediates H3K9me2 deposition and silencing at stimulus response genes in a DNA methylation independent manner	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	10		PAIR TXT	Hume Stroud	Aug 26, 2013
GSE39901	Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	92		WIG SRA Run Selector	Hume Stroud	Jan 11, 2013
GSE50942	The Histone Variant H2A.W Defines Heterochromatin and Promotes Chromatin Condensation in Arabidopsis	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	10		TXT WIG SRA Run Selector	Hume Stroud	Jul 05, 2014
GSE51304	Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	48		TXT WIG SRA Run Selector	Hume Stroud	Dec 15, 2013
GSE58029	The SET-domain protein SUVR5 mediates H3K9me2 deposition and silencing at stimulus response genes in a DNA methylation independent manner [RNA-Seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	4		TXT SRA Run Selector	Hume Stroud	Jun 06, 2014
GSE62799	The SNF2 and RING domain proteins FRG1 and 2 are required for RNA-directed DNA methylation in Arabidopsis [mRNA-Seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	6		BEDGRAPH SRA Run Selector	Hume Stroud	Nov 25, 2014
GSE62801	The SNF2 and RING domain proteins FRG1 and 2 are required for RNA-directed DNA methylation in Arabidopsis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	25		BEDGRAPH TXT WIG	Hume Stroud	Nov 25, 2014
GSE83607	Loss of the DNA methyltransferase MET1 induces H3K9 hypermethylation at PcG target genes in Arabidopsis, and relocation of H3K27 trimethylation to transposons [RNA-seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2		WIG SRA Run Selector	Hume Stroud	Jun 22, 2016
GSE96873	The histone H3 variant H3.3 regulates gene body DNA methylation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	25		TXT	Hume Stroud	Apr 24, 2017
GSE97231	The histone H3 variant H3.3 regulates gene body DNA methylation in Arabidopsis thaliana [RNA-Seq]	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2		TXT SRA Run Selector	Hume Stroud	Apr 24, 2017