93 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterExpression profiling by high throughput sequencing Remove filterOryza sativa Japonica Group Remove filterSRA Run Selector
GSE30367
Transcriptome analysis of rice roots and tips in early development by massive parallel sequencing
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
10 Simon Lieven Imanuel Johannes Denil Jan 12, 2012
GSE38480
Transcriptome and methylome interactions in rice hybrids
12 Blake C. Meyers Jul 10, 2012
GSE36696
Comparative transcriptome analysis of transporters, phytohormone and lipid metabolism pathways in response to arsenic stress in rice (Oryza Sativa L.)
  • Link icon Oryza sativa Japonica Group
20 Lujun Yu Jan 09, 2013
GSE35843
Transcriptional reprogramming by root knot and migratory nematode infection in rice
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
21 Simon Lieven Imanuel Johannes Denil Jan 10, 2013
GSE43577
Transcriptional analysis of giant cells induced by root knot nematodes in rice
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
8 Simon Lieven Imanuel Johannes Denil Aug 07, 2013
GSE50777
Transcriptomes of isolated rice gametes characterized by deep sequencing: Evidence for distinct sex-dependent chromatin and epigenetic states before fertilization
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
9 Venkatesan Sundaresan Oct 31, 2013
GSE65022
Genome-wide transcriptome analysis of rice in response to controlled drought stress at vegetative
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
4 Andy Pereira Jan 16, 2015
GSE65024
Transcriptome analysis of Osbhlh148 mutant plants under controlled drought stress and well-watered conditions at vegetative stage
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
8 Andy Pereira Jan 16, 2015
GSE65025
Transcriptome analysis of Oshsfa2e mutant plants under controlled drought stress and well-watered conditions at vegetative stage
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
8 Andy Pereira Jan 16, 2015
GSE67588
Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
33 Adam Bogdanove May 01, 2015
GSE67958
Host transcriptional reprogramming in response to the rice bacterial blight pathogen Xanthomonas oryzae pv.oryzae constitutively expressing the X. oryzae pv. oryzicola TAL2a effector from the high copy vector pKEB31
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
6 Adam Bogdanove May 01, 2015
GSE68299
Regulation of histone methylation and gene expression reprogramming in rice inflorescence meristem
  • Link icon Oryza sativa Japonica Group
14 shaoli zhou May 14, 2015
GSE57707
Systemic suppression of the rice shoot metabolism upon root rot nematode infection
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
8 Simon Lieven Imanuel Johannes Denil May 18, 2015
GSE73220
RNA-Seq of rice endosperm under high temperature
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
4 ying zhu Oct 19, 2015
GSE56462
Transcriptome profiling of various organs at different developmental stages in rice (paired-end)
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
8 Huan Wang Nov 25, 2015
GSE56463
Transcriptome profiling of various organs at different developmental stages in rice (single-end)
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
8 Huan Wang Nov 25, 2015
GSE45908
Gene expression profiles in growth-inhibition rice seedling implanted by the low-energy N+ beam
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
3 Huiyuan Ya Apr 09, 2016
GSE81436
The ortholog of DDM1 is mainly required for CHG and CG methylation of heterochromatin and is involved in DRM2-mediated CHH methylation that targets mostly genic regions of the rice genome
  • Link icon Oryza sativa Japonica Group
17 chao zhou Jun 13, 2016
GSE75131
Host transcriptional reprogramming in response to the rice bacterial blight pathogen Xanthomonas oryzae pv. oryzae strain BLS354
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
3 Adam Bogdanove Jul 07, 2016
GSE42467
RNase ZS1-mediated UbL40 mRNA decay controls thermo-sensitive genic male sterility in hybrid rice
  • Expression profiling by high throughput sequencing
  • Link icon Oryza sativa Japonica Group
2 Hai Zhou Aug 01, 2016