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59 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Neurospora crassa		SRA Run Selector
GSE41484	Multidimensional regulation in transcriptome during sexual development in Neurospora crassa revealed with RNA sequencing	Expression profiling by high throughput sequencing	Neurospora crassa	16	TXT SRA Run Selector	Francesc Lopez	Oct 10, 2013
GSE44673	Evidence of a critical role for cellodextrin transporter 2 (CDT-2) in both cellulose and hemicellulose degradation and utilization in Neurospora crassa	Expression profiling by high throughput sequencing	Neurospora crassa	3	TXT SRA Run Selector	Pengli Cai	Sep 25, 2014
GSE45406	Genome Wide Association identifies Novel Loci Involved Fungal Communication	Expression profiling by high throughput sequencing	Neurospora crassa	112	RPKM SRA Run Selector	Charles Robert Hall	Mar 28, 2013
GSE50205	Identification of the transcriptional profile of the hyphal tip of Neurospora crassa	Expression profiling by high throughput sequencing	Neurospora crassa	1	RPKM SRA Run Selector	Charles Robert Hall	Aug 28, 2013
GSE51091	Transcriptional comparison of the filamentous fungus Neurospora crassa growing on three major monosaccharides D-glucose, D-xylose and L-arabinose	Expression profiling by high throughput sequencing	Neurospora crassa	5	TXT SRA Run Selector	Jingen Li	Mar 17, 2014
GSE52153	Transcriptional profiling of staurosporine-induced cell death in wild type versus Δczt-1 in Neurospora crassa	Expression profiling by high throughput sequencing	Neurospora crassa	4	TXT SRA Run Selector	António Pedro Gonçalves	Jul 01, 2014
GSE52316	VIB1, a link between glucose signaling and carbon catabolite repression, is essential for plant cell wall degradation by Neurospora crassa	Expression profiling by high throughput sequencing	Neurospora crassa	9	FPKM_TRACKING SRA Run Selector	N. Louise Glass	Jul 08, 2014
GSE53013	Transcriptional profiling of staurosporine-induced cell death in Vogel's minimal medium with different concentrations of calcium	Expression profiling by high throughput sequencing	Neurospora crassa	6	TXT SRA Run Selector	António Pedro Gonçalves	Dec 05, 2014
GSE53040	Transcriptional profiling of wild type Neurospora crassa cells treated with novel antifungal agents	Expression profiling by high throughput sequencing	Neurospora crassa	6	TXT SRA Run Selector	António Pedro Gonçalves	Nov 25, 2015
GSE53534	Genome-wide characterization of light-regulated genes in Neurospora crassa	Expression profiling by high throughput sequencing	Neurospora crassa	10	TXT SRA Run Selector	Kristina M Smith	Aug 01, 2014
GSE61949	Genome-wide analysis of the endoplasmic reticulum stress response during lignocellulase synthesis in Neurospora crassa	Expression profiling by high throughput sequencing	Neurospora crassa	21	TXT SRA Run Selector	feiyu fan	Mar 25, 2015
GSE68514	Identification of direct target genes of the Neurospora crassa essential plant biomass deconstruction transcription factors CLR-1, CLR-2 and XLR-1 (RNA-Seq)	Expression profiling by high throughput sequencing	Neurospora crassa	11	TXT SRA Run Selector	James Craig	Sep 01, 2015
GSE71032	Codon usage influences the local rate of translation elongation to regulate co-translational protein folding	Expression profiling by high throughput sequencing Other	Neurospora crassa	8	BED FA WIG SRA Run Selector	Yunkun Dang	Jul 18, 2015
GSE73838	The Protein Non-anchored cell wall protein NCW-1 promotes cellulase production through effects on cellobiose uptake in Neurospora crassa	Expression profiling by high throughput sequencing	Neurospora crassa	2	TXT SRA Run Selector	liangcai lin	Sep 30, 2016
GSE78157	Genomic analysis of N. crassa histone H1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Neurospora crassa	22	TDF TXT SRA Run Selector	Zachary A Lewis	Apr 20, 2016
GSE82222	Neurospora crassa genome organization requires subtelomeric facultative heterochromatin	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Neurospora crassa	16	BCF FASTA GTF TDF TXT XLSX SRA Run Selector	Andrew David Klocko	Oct 27, 2016
GSE88985	The transcription factor PDR-1 is a multi-functional regulator and key component of pectin deconstruction and catabolism in Neurospora crassa	Expression profiling by high throughput sequencing	Neurospora crassa	20	CSV TXT SRA Run Selector	Nils Thieme	May 19, 2017
GSE89602	Effects of combined heat shock and glucose-deprivation on wild type and os2 mutant cells of Neurospora crassa.	Expression profiling by high throughput sequencing	Neurospora crassa	6	TXT SRA Run Selector	Nora Plesofsky	Nov 22, 2016
GSE90611	Network reconstruction and systems analysis of plant cell wall deconstruction by Neurospora crassa (RNA-seq)	Expression profiling by high throughput sequencing	Neurospora crassa	12	FPKM_TRACKING SRA Run Selector	Areejit Samal	Sep 19, 2017
GSE92848	A Fungal Transcription Factor Essential for Starch Degradation Regulates Primary Carbon and Nitrogen Metabolism and Amino Acid Biosynthesis	Expression profiling by high throughput sequencing	Neurospora crassa	21	TXT SRA Run Selector	Yi Xiong	Apr 09, 2017