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13 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Caenorhabditis elegans			BEDGRAPH
GSE33023	mRNA-seq of L1 larvae recovering from arrest	Expression profiling by high throughput sequencing	Caenorhabditis elegans	10		BAM BEDGRAPH BW GTF TXT SRA Run Selector	Colin Maxwell	Apr 25, 2012
GSE42714	Integral nuclear pore proteins bind to Pol III genes and are required for Pol III transcript processing in C. elegans [seq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Caenorhabditis elegans	21		BEDGRAPH WIG SRA Run Selector	Kohta Ikegami	Sep 05, 2013
GSE42741	Chromatin Immunoprecipitation of Nuclear Pore Proteins in C. elegans	Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Caenorhabditis elegans	23		BEDGRAPH PAIR WIG	Kohta Ikegami	Sep 05, 2013
GSE53144	Male and Female DNA and RNA sequencing in several nematode species	Expression profiling by high throughput sequencing Other	Caenorhabditis brenneri Caenorhabditis briggsae Caenorhabditis elegans Caenorhabditis remanei Pristionchus pacificus	31		BEDGRAPH FPKM_TRACKING SRA Run Selector	Sarah Elizabeth Albritton	Apr 17, 2014
GSE85445	HTS comparison of sig-7 (RNAi) vs WT C. elegans early stage embryos	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Caenorhabditis elegans	12		BEDGRAPH	Susan Strome	Aug 10, 2016
GSE85747	Initiation of mtDNA transcription is followed by pausing, and diverge across human cell types and during evolution	Expression profiling by high throughput sequencing Third-party reanalysis	Caenorhabditis elegans Drosophila melanogaster Homo sapiens Macaca mulatta Mus musculus Pan troglodytes Rattus norvegicus			BEDGRAPH XLS	Dan Mishmar	Sep 30, 2016
GSE98919	Global proteomic- and transcriptomic analyses of starvation responses reveal a central role for lipoprotein metabolism in acute starvation survival in C. elegans	Expression profiling by high throughput sequencing	Caenorhabditis elegans	42		BEDGRAPH SRA Run Selector	Susanne Mandrup	Jul 01, 2017
GSE100623	SET-9 and SET-26, the C. elegans homologs of human MLL5, are critical for germline development and longevity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	24		BEDGRAPH TXT SRA Run Selector	Siu Sylvia Lee	May 31, 2018
GSE108848	SET-9 and SET-26 are H3K4me3 readers and play critical roles in germline development and longevity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	32		BEDGRAPH XLSX SRA Run Selector	Siu Sylvia Lee	May 31, 2018
GSE134573	RNAi pathways repress reprogramming of C. elegans germ cells during heat stress	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	36		BEDGRAPH TXT SRA Run Selector	Alicia Kathryn Rogers	Mar 06, 2020
GSE168803	Condensin DC spreads linearly and bidirectionally from recruitment sites to create loop-anchored TADs in C. elegans	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Caenorhabditis elegans	150		BEDGRAPH BW HIC TXT	Jun Kim	Mar 23, 2021
GSE162063	Using Auxin-inducible-degradation System to Interrogate Tissue-specific Transcriptional Programs of HSF-1 in Reproduction and Heat Shock Response. [ChIP-Seq]	Expression profiling by high throughput sequencing	Caenorhabditis elegans	40		BED BEDGRAPH XLSX SRA Run Selector	Jian Li	Jul 01, 2021
GSE198682	Chromosomal duplications increase gene dosage and mRNA level in C. elegans	Other Expression profiling by high throughput sequencing	Caenorhabditis elegans	41		BEDGRAPH TAB	Sevinc Ercan	Mar 22, 2022