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88 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Caenorhabditis elegans		BW
GSE33023	mRNA-seq of L1 larvae recovering from arrest	Expression profiling by high throughput sequencing	Caenorhabditis elegans	10	BAM BEDGRAPH BW GTF TXT SRA Run Selector	Colin Maxwell	Apr 25, 2012
GSE28562	Genome-wide RNA expression in muscle-enriched embryos across different mutations.	Expression profiling by high throughput sequencing	Caenorhabditis elegans	11	BB BW	Diane E Trout	Jun 22, 2012
GSE28563	HLH-1 binding in muscle-enriched embryos and RNA expression in muscle-enriched embryos across different mutations	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	15	BB BW	Diane E Trout	Jun 22, 2012
GSE42819	The landscape of RNA polymerase II transcription initiation in C. elegans reveals a novel regulatory architecture	Expression profiling by high throughput sequencing Other	Caenorhabditis elegans	5	BB BW SRA Run Selector	Thomas A Down	Mar 29, 2013
GSE49946	Global effects of the CSR-1 RNA interference pathway on transcriptional landscape	Expression profiling by high throughput sequencing	Caenorhabditis elegans	8	BW SRA Run Selector	Germano Cecere	Feb 28, 2014
GSE62833	The DREAM complex promotes gene body deposition of H2A.Z for target repression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Caenorhabditis elegans	20	BW XLSX SRA Run Selector	Przemyslaw Aleksander Stempor	Apr 02, 2015
GSE61564	A comprehensive catalog of the C. elegans dsRNAome	Expression profiling by high throughput sequencing	Caenorhabditis elegans	6	BED BW SRA Run Selector	Joseph M. Whipple	Apr 09, 2015
GSE65765	H3K36 methylation promotes longevity by enhancing transcriptional fidelity [Worm RNA-Seq]	Expression profiling by high throughput sequencing	Caenorhabditis elegans	4	BW SRA Run Selector	Gregory Donahue	Jul 17, 2015
GSE65767	H3K36 methylation promotes longevity by enhancing transcriptional fidelity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans Saccharomyces cerevisiae	92	BW	Gregory Donahue	Jul 17, 2015
GSE71720	Defining the Roles and Regulation of the GATA-factor ELT-2 in the C. elegans Endoderm	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Caenorhabditis elegans	12	BED BW SRA Run Selector	Erin Osborne Nishimura	Mar 30, 2016
GSE79567	Nucleosome fragility is associated with future transcriptional response to developmental cues and stress in C. elegans	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	24	BED BW TXT SRA Run Selector	Tess Jeffers	Oct 18, 2016
GSE87523	A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress [RNA-seq]	Expression profiling by high throughput sequencing	Caenorhabditis elegans	20	BW SRA Run Selector	Julie Ahringer	Mar 11, 2017
GSE87524	A team of heterochromatin factors collaborates with small RNA pathways to combat repetitive elements and germline stress	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Caenorhabditis elegans	36	BW	Julie Ahringer	Mar 11, 2017
GSE94077	Analysis of nonsense-mediated mRNA decay in daf-2 mutants	Expression profiling by high throughput sequencing Other	Caenorhabditis elegans	8	BW SRA Run Selector	Seung-Jae V Lee	Mar 17, 2017
GSE87741	Cooperation between a hierarchical set of recruitment sites specifically targets the C. elegans dosage compensation complex to the X chromosomes.	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Caenorhabditis elegans	82	BED BW TXT SRA Run Selector	Sarah Elizabeth Albritton	May 09, 2017
GSE95230	Role of STA-1 and SID-3 upon Orsay virus infection in C. elegans	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	22	BW NARROWPEAK	Eric Alexander Miska	Aug 11, 2017
GSE84581	Dynamic Control of X-Chromosome Conformation and Repression by a Histone H4K20 Demethylase	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	13	BW CSV MATRIX TXT SRA Run Selector	Barbara J. Meyer	Aug 31, 2017
GSE101964	Adult-specific trimethylation of histone H3 lysine 4 is prone to dynamic changes with aging in C. elegans somatic cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Caenorhabditis elegans	28	BW FPKM_TRACKING SRA Run Selector	Siu Sylvia Lee	Dec 20, 2017
GSE97775	Two distinct transcription termination modes dictated by promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	51	BW TAB SRA Run Selector	Sarah Carl	Feb 05, 2018
GSE107175	Quantitating transcription factor redundancy: The relative roles of the ELT-2 and ELT-7 GATA factors in the C. elegans endoderm	Expression profiling by high throughput sequencing	Caenorhabditis elegans	15	BW GTF XLSX SRA Run Selector	Erin Osborne Nishimura	Feb 22, 2018