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89 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Drosophila melanogaster		BEDGRAPH
GSE207720	RDD reveals the landscape of RNA-associated chromatin DNA-DNA interactome and gene regulation	Other Expression profiling by high throughput sequencing	Drosophila melanogaster	14	BEDGRAPH HIC TXT	Tian (Simon) Zhongyuan	May 21, 2024
GSE223555	Comparison of STAMP and TRIBE for identifying the targets of RNA-binding proteins in human and Drosophila cells [Drosophila]	Expression profiling by high throughput sequencing Other	Drosophila melanogaster	14	BEDGRAPH	Katharine Abruzzi	Feb 05, 2023
GSE223557	Comparison of STAMP and TRIBE for identifying the targets of RNA-binding proteins in human and Drosophila cells	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens	24	BEDGRAPH	Katharine Abruzzi	Feb 03, 2023
GSE85191	Widespread transcriptional pausing and elongation control at enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Mus musculus	37	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 09, 2018
GSE114467	The Integrator complex terminates promoter-proximal transcription at protein-coding genes	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	16	BEDGRAPH BW SRA Run Selector	Karen Adelman	Nov 27, 2019
GSE224967	Chromatin state transitions in the Drosophila intestinal lineage reveal principles of cell type specification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	63	BEDGRAPH GFF NARROWPEAK	Allison Bardin	Oct 26, 2023
GSE21283	RNA-Seq of Drosophila cell line Dmel2	Expression profiling by high throughput sequencing	Drosophila melanogaster	1	BEDGRAPH TXT SRA Run Selector	Michael Boutros	Apr 10, 2010
GSE190210	NanoDam identifies novel temporal transcription factors conserved between the Drosophilacentral brain and visual system	Other Expression profiling by high throughput sequencing	Drosophila melanogaster	49	BEDGRAPH MTX TSV SRA Run Selector	Andrea Brand	Aug 03, 2022
GSE93828	E(Pc) ChIP-seq experiment in fruitfly testis somatic gonadal cells and RNA-seq experiment in fruitfly testis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	8	BEDGRAPH TXT SRA Run Selector	Xin Chen	Jan 20, 2017
GSE69335	Genome-wide profiling of nucleosome sensitivity and chromatin accessibility to MNase in D. melanogaster [RNA-seq]	Expression profiling by high throughput sequencing	Drosophila melanogaster	4	BEDGRAPH SRA Run Selector	Razvan V. Chereji	Sep 17, 2015
GSE69336	Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in D. melanogaster	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Drosophila melanogaster	27	BEDGRAPH	Razvan V. Chereji	Sep 17, 2015
GSE211397	The NELF pausing checkpoint mediates the functional divergence of Cdk9	Expression profiling by high throughput sequencing Other	Drosophila melanogaster	30	BEDGRAPH BW	Michael DeBerardine	Mar 22, 2023
GSE179507	Transcriptomic analysis of HES induced [E(spl)mγ and dpn; DM] Drosophila larval primary CNS tumours vs HES allograft tumours in w1118 host flies	Expression profiling by high throughput sequencing	Drosophila melanogaster	9	BEDGRAPH TXT SRA Run Selector	Christos Delidakis	Sep 01, 2021
GSE77607	Transcription factors GAF and HSF act at distinct regulatory steps to modulate stress-induced gene activation	Expression profiling by high throughput sequencing	Drosophila melanogaster	18	BEDGRAPH TXT SRA Run Selector	Fabiana Duarte	Aug 12, 2016
GSE25180	Non-canonical compensation of zygotic X transcription in Drosophila melanogaster development revealed through single embryo RNA-Seq	Expression profiling by high throughput sequencing	Drosophila melanogaster	24	BEDGRAPH CUFF SAM SRA Run Selector	Michael Eisen	Feb 07, 2011
GSE72830	Expression profiling of S2 cells overexpressing wildtype or polymerization-defective Ph	Expression profiling by high throughput sequencing	Drosophila melanogaster	6	BEDGRAPH DIFF SRA Run Selector	Nicole Francis	Jan 14, 2016
GSE58955	GAGA Factor maintains promoters in nucleosome-free conformation and allows promoter-proximal pausing [GRO-seq]	Expression profiling by high throughput sequencing	Drosophila melanogaster	6	BEDGRAPH SRA Run Selector	Nicholas Fuda	Apr 04, 2015
GSE58957	GAGA Factor maintains promoters in nucleosome-free conformation and allows promoter-proximal pausing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	18	BEDGRAPH	Nicholas Fuda	Apr 04, 2015
GSE253140	Unbiased screening of regulatory insulators	Expression profiling by high throughput sequencing Other	Drosophila melanogaster	16	BEDGRAPH MCOOL TSV	Maria Cristina Gambetta	Sep 09, 2024
GSE49587	Developmental arrest of Drosophila survival motor neuron (Smn) mutants accounts for differences in expression of minor intron-containing genes	Expression profiling by high throughput sequencing Third-party reanalysis	Drosophila melanogaster	4	BEDGRAPH TXT SRA Run Selector	Eric L Garcia	Aug 07, 2013