GEO Browser - GEO

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39 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Drosophila melanogaster		WIG
GSE24012	Transcriptional profiling of EJC depletion by RNA-Seq using the SOLiD platform (Applied Biosystems)	Expression profiling by high throughput sequencing	Drosophila melanogaster	6	BAM TXT WIG SRA Run Selector	Hugo Lavoie	Oct 20, 2010
GSE24324	The Drosophila melanogaster Transcriptome by Paired-End RNA-Sequencing	Expression profiling by high throughput sequencing	Drosophila melanogaster	12	PSLX WIG SRA Run Selector	Bryce Daines	Sep 24, 2010
GSE24449	Genome-wide comparative ChIP-seq data of CTCF and RNA-seq data in Drosophila white prepupa on Illumina Genome Analyzer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila pseudoobscura Drosophila simulans Drosophila yakuba	21	BED TXT WIG SRA Run Selector	Kevin P. White	Nov 08, 2012
GSE24521	Polycomb preferentially targets stalled promoters of coding and non-coding transcripts	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	14	WIG SRA Run Selector	Daniel Enderle	Dec 21, 2010
GSE25025	Expression profile of third instar larval fat body and midgut tissues	Expression profiling by high throughput sequencing	Drosophila melanogaster	2	WIG SRA Run Selector	Terry L. Orr-Weaver	Nov 02, 2010
GSE29526	Expression profile of 16C ovarian follicle cells	Expression profiling by high throughput sequencing	Drosophila melanogaster	2	WIG SRA Run Selector	Terry L. Orr-Weaver	May 27, 2011
GSE29527	ORC2, RNAPII, and tetra-acetylated histone H4 ChIP-chip egg chambers and RNA-Seq 16C ovarian follicle cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Drosophila melanogaster	8	NDF TXT WIG	Terry L. Orr-Weaver	May 27, 2011
GSE31194	Parallel high-throughput RNA-sequencing suggests little overlap of differential gene expression between knockout of TDP-43 and its over-expression in central nervous system in Drosophila	Expression profiling by high throughput sequencing	Drosophila melanogaster	14	WIG SRA Run Selector	Dennis J Hazelett	Jul 01, 2012
GSE31900	Developmental Control of Gene Copy Number by Repression of Replication Initiation and Fork Progression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by genome tiling array	Drosophila melanogaster	16	BED TXT WIG	Terry L. Orr-Weaver	Oct 18, 2011
GSE33017	Expression profile of third instar larval salivary gland tissue	Expression profiling by high throughput sequencing	Drosophila melanogaster	4	WIG SRA Run Selector	Terry L. Orr-Weaver	Oct 18, 2011
GSE35842	RIP-seq analysis of eukaryotic Sm proteins identifies three major categories of Sm-containing ribonucleoproteins	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	28	BEDGRAPH RPKM TXT WIG SRA Run Selector	Zhipeng Lu	Dec 01, 2013
GSE38727	A common set of DNA regulatory elements shapes Drosophila appendages	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	22	BED TXT WIG XLS SRA Run Selector	Daniel J McKay	Nov 07, 2013
GSE38998	RNA sequencing in fly heads to examine the effect of spermidine feeding on transcription in the ageing fly brain.	Expression profiling by high throughput sequencing	Drosophila melanogaster	8	BED WIG SRA Run Selector	Jamie M Kramer	Sep 01, 2013
GSE39271	Synergistic interactions between CLAMP and MSL complex facilitate Drosophila dosage compensation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	15	RPKM WIG SRA Run Selector	Erica Larschan	Jul 15, 2013
GSE43341	Chromatin marking is associated to transcriptional stability during fly development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	6	WIG SRA Run Selector	Enrique Blanco	Jul 23, 2015
GSE49106	Nucleosomes are context-specific, H2A.Z modulated barriers to RNA polymerase	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	12	BED WIG XML SRA Run Selector	Jorja Henikoff	Mar 06, 2014
GSE49197	Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster	Expression profiling by high throughput sequencing Other	Drosophila melanogaster	12	WIG SRA Run Selector	Joshua Griffin Dunn	Dec 05, 2013
GSE51138	Ago2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	7	WIG	Matthew Taliaferro	Sep 25, 2013
GSE52887	Next Generation Sequencing analysis of Functional Interactions among Insulator Proteins	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	14	WIG	Olivier Cuvier	Feb 01, 2014
GSE56551	Transcriptional activation without chromatin marking in developmentally regulated genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	13	BED WIG	Enrique Blanco	Jul 23, 2015