GEO Browser - GEO

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24 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Macaca mulatta		BW
GSE42413	The Evolution of Lineage-Specific Regulatory Activities in the Human Embryonic Limb	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	56	BAM BED BW SRA Run Selector	Justin Cotney	Jul 02, 2013
GSE53942	RNA-seq of poly(A)-/ribo- or poly(A)+ RNAs from mouse and rhesus ES cells	Expression profiling by high throughput sequencing	Macaca mulatta Mus musculus	6	BW SRA Run Selector	Li Yang	Jan 10, 2014
GSE85337	Natural Selection has Shaped Coding and Non-coding Transcription in Primate CD4+ T-cells	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes Rattus norvegicus	24	BW SRA Run Selector	Charles G Danko	Dec 29, 2016
GSE106577	Nucleosome profiles for mammalian tissues [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Sus scrofa Tupaia belangeri	18	BW SRA Run Selector	Yumei Li	Aug 07, 2018
GSE106580	Nucleosome profiles for mammalian tissues	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Sus scrofa Tupaia belangeri	39	BW	Yumei Li	Aug 06, 2018
GSE111930	An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Gorilla gorilla Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	60	BW HIC TDF TXT SRA Run Selector	Lei Tian	Aug 11, 2020
GSE114191	Repurposing of promoters and enhancers during mammalian evolution	Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Mus musculus Oryctolagus cuniculus Rattus norvegicus	78	BW SRA Run Selector	Francesco Nicola Carelli	Oct 01, 2018
GSE128537	Transcriptomic and open chromatin atlas of high-resolution anatomical regions in the rhesus macaque brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	449	BW GTF TXT SRA Run Selector	keying Lu	Dec 30, 2019
GSE130570	Chromatin Accessibility and Transcription Dynamics During In Vitro Astrocyte Differentiation of Huntington’s Disease Monkey Pluripotent Stem Cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	40	BW SRA Run Selector	Isaac Kremsky	Jun 08, 2020
GSE130871	Hominin-specific regulatory elements selectively emerged in oligodendrocytes and are disrupted in autism patients	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Pan troglodytes	49	BW NARROWPEAK TXT SRA Run Selector	Menno P Creyghton	Dec 20, 2019
GSE132413	Assembly of full-length macaque gene models	Expression profiling by high throughput sequencing	Macaca mulatta	13	BW SRA Run Selector	Shuxian Li	Jun 01, 2021
GSE135791	Pachytene piRNA Genes Are Rapidly Diverging Among Modern Humans	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	72	BW NARROWPEAK TXT SRA Run Selector	Tianxiong Yu	Dec 23, 2019
GSE147724	Long first exons and epigenetic marks distinguish conserved pachytene piRNA clusters from other mammalian genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta Mus musculus	19	BW SRA Run Selector	Tianxiong Yu	Oct 24, 2020
GSE158668	De novo assembly of macaque gene models	Expression profiling by high throughput sequencing	Macaca mulatta Mus musculus	14	BW SRA Run Selector	Qi Trinity Peng	Apr 17, 2021
GSE158934	Evolution of regulatory signatures in primate cortical neurons at cell-type resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta Pan troglodytes	46	BW	Stella Dracheva	Oct 03, 2020
GSE160247	Regulatory diversity contributes to divergent transcriptional response to dietary changes in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	20	BW SRA Run Selector	Kevin Richard Costello	Apr 01, 2021
GSE163177	3D Genome of macaque fetal brain reveals evolutionary innovations during primate corticogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	18	BED BEDPE BW HIC NARROWPEAK TXT SRA Run Selector	Yuting Liu	Dec 15, 2020
GSE166104	The Testis-Specific Transcription Factor TCFL5 Responds to A-MYB to Elaborate Male Meiotic Program in Mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	Macaca mulatta Mus musculus	57	BW SRA Run Selector	Tianxiong Yu	Jan 11, 2023
GSE175679	Distinct nuclear compartment-associated genome architecture in the developing mammalian brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	62	BED BW H5 SRA Run Selector	Tomasz Nowakowski	May 28, 2021
GSE196210	Morphine Re-arranges Chromatin Spatial Architecture of Primate Cortical Neuron [RNA-seq]	Expression profiling by high throughput sequencing	Macaca mulatta	6	BW TXT	Liang Wang	Sep 12, 2023