GEO Browser - GEO

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1756 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		BED
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE19323	PTB CLIP-seq	Expression profiling by high throughput sequencing	Homo sapiens	4	BED SRA Run Selector	Xiang-Dong Fu	Dec 24, 2009
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE19486	Human variation in PolII and NF-KappaB binding	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Pan troglodytes	149	BED TXT	Flora Vaccarino	Mar 22, 2010
GSE20071	Pol II and its associated epigenetic marks are present at pol III-transcribed non-coding RNA genes (II)	Expression profiling by high throughput sequencing	Homo sapiens	1	BED GRAPH SRA Run Selector	Iouri Chepelev	Apr 25, 2010
GSE20072	Pol II and its associated epigenetic marks are present at pol III-transcribed non-coding RNA genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	7	BED GRAPH	Iouri Chepelev	Apr 25, 2010
GSE22765	SplicePL: de novo splice junction detection from paired-end RNA-seq reads	Expression profiling by high throughput sequencing	Homo sapiens	1	BED SRA Run Selector	Lifeng Tian	Jul 13, 2010
GSE25292	Altered antisense-to-sense transcript ratios in breast cancer	Expression profiling by high throughput sequencing Expression profiling by array	Homo sapiens	28	BED TXT	Kornelia Polyak	Dec 10, 2010
GSE25932	Altered antisense-to-sense transcript ratios in breast cancer: ASSAGE	Expression profiling by high throughput sequencing	Homo sapiens	3	BED SRA Run Selector	Kornelia Polyak	Dec 10, 2010
GSE24447	A unique chromatin signature uncovers early developmental enhancers in humans	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	16	BED TXT SRA Run Selector	Alvaro Rada	Dec 15, 2010
GSE26463	Regulation of alternative splicing by the core spliceosomal machinery	Expression profiling by high throughput sequencing	Homo sapiens	3	BED TXT SRA Run Selector	Qun Pan	Feb 01, 2011
GSE15780	Interplay between c-Jun and TAp73α/β contributes to the apoptosis-survival balance	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	15	BED TSV TXT SRA Run Selector	Marion Lohrum	Mar 01, 2011
GSE27443	RNA-Seq of rRNA depleted circulating endothelial progenitor cells (cEPCs) in trisomy 21 and euploid samples	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	2	BED BEDGRAPH TXT	Valerio Costa	May 05, 2011
GSE27463	Global Analysis of the Immediate Transcriptional Effects of Estrogen Signaling Reveals a Rapid, Extensive, and Transient Response	Expression profiling by high throughput sequencing	Homo sapiens	8	BED TSV SRA Run Selector	W. Lee Kraus	May 06, 2011
GSE27823	Reprogramming Transcriptional Responses through Functionally-Distinct Classes of Enhancers in Prostate Cancer Cells [ChIP-Seq, Gro-Seq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	30	BED BEDGRAPH FA SRA Run Selector	Christopher Benner	May 15, 2011
GSE27824	Reprogramming Transcriptional Responses through Functionally-Distinct Classes of Enhancers in Prostate Cancer Cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	42	BED BEDGRAPH FA	Christopher Benner	May 15, 2011
GSE29580	RNA-seq of two paired normal and cancer tissues in two stage III colorectal cancer patients	Expression profiling by high throughput sequencing	Homo sapiens	4	BED SRA Run Selector	Ji-Dung Luo	May 28, 2011
GSE30198	Digital gene expression and global mapping of polyadenylation sites with PolyA-Seq	Expression profiling by high throughput sequencing	Canis lupus familiaris Homo sapiens Macaca mulatta Mus musculus Rattus norvegicus	26	BED SRA Run Selector	Adnan Derti	Jun 25, 2011
GSE29943	Unstressed HeLa cells and ELAVL1/HuR knock down conditions: polyA RNA-Seq, small RNA-Seq, and PAR-CLIP	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	9	BED TXT WIG SRA Run Selector	Marvin Jens	Jun 30, 2011