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1757 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		BED
GSE264713	A first comprehensive analysis of Transcribed Ultra Conserved Regions uncovers important regulatory functions of novel non-coding transcripts in gliomas	Expression profiling by high throughput sequencing	Homo sapiens	12	BED	Roger Abounader	Apr 30, 2024
GSE39229	Mapping Epigenomic Type-Specific Differences Occurring During Hematopoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BED RPKM TXT	Brian J Abraham	Mar 25, 2013
GSE39537	Mapping Epigenomic Type-Specific Differences Occurring During Hematopoiesis [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens	1	BED RPKM SRA Run Selector	Brian J Abraham	Mar 25, 2013
GSE159243	Remodeling of the m6A landscape in the heart reveals conserved post-transcriptional events underlying cardiomyocyte hypertrophy	Expression profiling by high throughput sequencing	Homo sapiens	20	BED CSV TXT SRA Run Selector	Federica Accornero	Nov 01, 2020
GSE73785	Three-dimensional disorganisation of the cancer genome occurs coincident with long range genetic and epigenetic alterations	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	22	BED	Joanna Achinger-Kawecka	Apr 04, 2016
GSE171074	The potential of epigenetic therapy to target the 3D epigenome in endocrine-resistant breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array Other Methylation profiling by high throughput sequencing	Homo sapiens	88	BED BW HIC IDAT NARROWPEAK TXT	Joanna Achinger-Kawecka	Dec 12, 2021
GSE145883	Comparative analysis of genome-wide UV repair events in two primates show different rates but similar distribution.	Expression profiling by high throughput sequencing Other	Homo sapiens Microcebus murinus	8	BED SRA Run Selector	Ogun Adebali	Apr 06, 2020
GSE188486	Leveraging the Epigenomic Landscape to identify Histology-Specific Master transcription factors and to functionally annotate risk loci in renal cell carcinoma	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	144	BED BW TSV SRA Run Selector	Elio Adib	Nov 01, 2022
GSE193319	ERK-Mediated Phosphorylation of OLA1 Controls Adaptive Mitochondria to Nucleus Communication Regulating Cellular Homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BED GTF	Adeleye J. Afolayan	Jan 14, 2022
GSE154741	Autocrine vitamin D signaling switches off pro-inflammatory programs of Th1 cells	Expression profiling by high throughput sequencing Other	Homo sapiens	45	BED BW TXT XLSX SRA Run Selector	Behdad (Ben) Afzali Khoshkbijari	Oct 19, 2021
GSE53215	Genome-wide profiling of histone H3 lysine 27 and lysine 4 trimethylation in multiple myeloma reveals the importance of Polycomb gene targeting and highlights EZH2 as a potential therapeutic target [Seq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	16	BED TAB SRA Run Selector	Prasoon Agarwal	Dec 31, 2015
GSE69253	Genome-wide profiling of histone H3 lysine 27 and lysine 4 trimethylation in multiple myeloma reveals the importance of Polycomb gene targeting and highlights EZH2 as a potential therapeutic target	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	BED CEL TAB	Prasoon Agarwal	Dec 31, 2015
GSE56826	Argonaute-1 binds transcriptional enhancers and controls constitutive and alternative splicing in human cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	28	BED BEDGRAPH TXT XLS SRA Run Selector	Eneritz Agirre	Sep 29, 2014
GSE60094	A chromatin code for alternative splicing involving an association between CTCF and HP1α proteins	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	34	BED BEDGRAPH CEL CHP TXT	Eneritz Agirre	Sep 30, 2014
GSE193240	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq II]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE211202	Co-transcriptional pseudouridylation of mRNAs by the H/ACA complex controls translational efficiency.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	32	BED BW SF	Federico Agostini	Jun 26, 2023
GSE154631	The SWI/SNF chromatin remodeling complex helps resolve R-loop-mediated transcription-replication conflicts	Other Expression profiling by high throughput sequencing	Homo sapiens	6	BED BIGWIG TXT SRA Run Selector	Andrés Aguilera	May 10, 2021
GSE55361	Systematic Mapping of ADAR1 Binding Reveals its Regulatory Roles in Multiple RNA Processing Pathways [CLIP-seq]	Expression profiling by high throughput sequencing	Homo sapiens	2	BED SRA Run Selector	Jaegyoon Ahn	Mar 11, 2015
GSE128477	A predictable conserved DNA base composition signature defines human core DNA replication origins	Other Expression profiling by high throughput sequencing	Homo sapiens	44	BED TXT XLS SRA Run Selector	ildem akerman	Sep 28, 2020
GSE188580	Genomewide m6A mapping uncovers dynamic changes in the m6A epitranscriptome of cisplatin-treated apoptotic HeLa cells	Expression profiling by high throughput sequencing	Homo sapiens	6	BED CSV SRA Run Selector	Bünyamin Akgül	Oct 28, 2022