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1756 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		BED
GSE196450	Context-dependent perturbations in chromatin folding and the transcriptome by cohesin and related factors	Expression profiling by high throughput sequencing Other	Homo sapiens	126	BED BW HIC TXT	Ryuichiro Nakato	Jul 28, 2023
GSE71780	Functional interdependency of BRD4 and DOT1L in MLL leukaemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	33	BED	Mark Dawson	Jun 12, 2016
GSE185066	Local euchromatin enrichment in lamina-associated domains anticipates their re-positioning in the adipogenic lineage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	82	BED BEDGRAPH BROADPEAK BW NARROWPEAK TXT SRA Run Selector	Philippe Collas	Mar 21, 2022
GSE34791	"Calling Cards" for DNA-binding proteins in mammalian cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	7	BED TXT SRA Run Selector	David Mayhew	Dec 31, 2011
GSE112346	4C-seq of insulin promoter, knockdown of INS promoter activity and Genome-wide maps of chromatin state in EndoC-βH1 Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	18	BED	Gary Felsenfeld	Apr 06, 2018
GSE151818	5-hydroxymethylcytosine is Dynamically Regulated During Forebrain Organoid Development and Prematurely Altered in Forebrain Organoids of Alzheimer’s Disease Patients	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	48	BED DIFF NARROWPEAK SRA Run Selector	Janise Nichole Kuehner	Apr 27, 2021
GSE35238	5-hydroxymethylcytosine is linked with expression of brain-specific protein-coding genes but not brain-specific microRNA host genes	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	6	BED BEDGRAPH	Sheroy Minocherhomji	Sep 01, 2015
GSE35235	5-hydroxymethylcytosine is linked with expression of brain-specific protein-coding genes but not brain-specific microRNA host genes (RNA-Seq)	Expression profiling by high throughput sequencing	Homo sapiens	1	BED SRA Run Selector	Sheroy Minocherhomji	Sep 01, 2015
GSE69905	5-hydroxymethylcytosine poises expression of genes involved in hematopoietic differentiation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	14	BED TXT SRA Run Selector	Xavier Tekpli	Jun 02, 2016
GSE97992	5hmC dynamically correlated with enhancer's activities during hES-to-Pancreatic endoderm cell differentiation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	29	BED BW	Jia Li	Apr 18, 2018
GSE213727	A Cleavage Product METTL3a-(238-580) Mediates m6A Methyltransferase Complex Assembly and mTOR Activation	Expression profiling by high throughput sequencing	Homo sapiens	10	BED BW	gao chuan	Aug 16, 2023
GSE124197	A Genome-wide CRISPR-Based Screen Identifies KAT7 as a Senescence Driver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	71	BED BIGWIG TXT SRA Run Selector	Yuxuan Zheng	Oct 09, 2020
GSE29282	A Hybrid Mechanism of Action for BCL6 in B Cells Defined by Formation of Functionally Distinct Complexes at Enhancers and Promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	46	BED BW TXT WIG SRA Run Selector	Katerina Hatzi	Aug 05, 2013
GSE241283	A MYOD-SKP2 axis boosts tumorigenesis in fusion negative rhabdomyosarcoma by preventing differentiation through p57Kip2 targeting	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BED HIC TXT	Matteo Cassandri	Aug 30, 2023
GSE125672	A Mediator-cohesin axis controls heterochromatin domain formation.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	58	BED BROADPEAK NARROWPEAK TXT	Robin H. van der Weide	Jan 11, 2022
GSE246223	A Mouse Model for Metabolic Dysfunction-associated Steatotic Liver Disease and Hepatocellular Carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	160	BED BW	Byung-Kwan Jeong	Jun 16, 2024
GSE116670	A Novel PI3K Regulator, ARID4B, Presents Synthetic Essentiality in PTEN-deficient Prostate Cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED TXT	Karoline Briegel	Aug 23, 2019
GSE109690	A Nucleosome Destabilizing Factor that Facilitates Transcription in Chromatin	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	28	BED BIGWIG BW TXT SRA Run Selector	Jia Fei	Apr 16, 2018
GSE200062	A SOX2 engineered epigenetic silencer factor represses the glioblastoma genetic program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	41	BED NARROWPEAK TSV	Luca Massimino	Aug 10, 2022
GSE52285	A Werner syndrome stem cell model unveils heterochromatin alterations as a driver of human aging	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	22	BED BEDGRAPH TXT SRA Run Selector	Jingyi Li	May 13, 2015