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156 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		BROADPEAK
GSE185066	Local euchromatin enrichment in lamina-associated domains anticipates their re-positioning in the adipogenic lineage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	82	BED BEDGRAPH BROADPEAK BW NARROWPEAK TXT SRA Run Selector	Philippe Collas	Mar 21, 2022
GSE125672	A Mediator-cohesin axis controls heterochromatin domain formation.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	58	BED BROADPEAK NARROWPEAK TXT	Robin H. van der Weide	Jan 11, 2022
GSE104690	A Non-canonical BCOR-PRC1.1 Complex Represses Differentiation Programs in Human ESCs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	42	BIGWIG BROADPEAK CSV SRA Run Selector	Micah Gearhart	Jan 11, 2018
GSE186201	A chemically-targetable transcription factor-chromatin remodeler interaction underlies SARS-CoV-2 susceptibility	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Chlorocebus sabaeus Homo sapiens	85	BROADPEAK BW NARROWPEAK TXT SRA Run Selector	Cigall Kadoch	Oct 11, 2022
GSE167409	A hidden layer of structural variation in transposable elements reveals potential genetic modifiers in human disease-risk loci	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	39	BROADPEAK TSV TXT SRA Run Selector	Frank M.J. Jacobs	Jan 17, 2022
GSE130205	A hybrid signal/sequence model to detect RNA polymerase activity in ATAC-seq	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	2	BROADPEAK SRA Run Selector	Ignacio Javier Tripodi	Apr 30, 2020
GSE118629	A prostate cancer chromatin interaction map	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	35	BED BROADPEAK TXT SRA Run Selector	Suhn K Rhie	Sep 13, 2019
GSE121198	ARID1A and PI3-Kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	51	BROADPEAK TAB	Ronald L. Chandler	Jul 01, 2019
GSE148474	ARID1A mutations promote P300-dependent endometrial invasion through super-enhancer hyperacetylation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	65	BROADPEAK NARROWPEAK TAB	Ronald L. Chandler	Nov 10, 2020
GSE190557	ARID1A-dependent maintenance of H3.3 is required for repressive CHD4-ZMYND8 chromatin interactions at super-enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	69	BROADPEAK NARROWPEAK TAB	Ronald L. Chandler	Sep 06, 2022
GSE183200	ASCL1 activates neuronal stem cell-like lineage programing through remodeling of the chromatin landscape in prostate cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	34	BROADPEAK BW NARROWPEAK	Amina Zoubeidi	Mar 30, 2022
GSE224422	ASCL1 is activated downsrteam of ROR2/CREB signaling pathway to support lineage plasticity.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BROADPEAK BW NARROWPEAK	Amina Zoubeidi	Aug 01, 2023
GSE130096	ATAC-Me captures spatiotemporal dynamics of DNA methylation across the chromatin accessible genome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	26	BROADPEAK TXT SRA Run Selector	Emily Hodges	May 01, 2019
GSE137376	Alteration of genome folding via engineered transposon insertion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	113	BROADPEAK BW TXT	Ross Hardison	Mar 14, 2020
GSE256262	Alternative isoform expression of key thermogenic genes in human beige adipocytes	Third-party reanalysis Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	46	BROADPEAK BW NARROWPEAK	Philippe Collas	May 14, 2024
GSE129382	An evolutionarily conserved function of polycomb silences the MHC class I antigen presentation pathway and enables immune evasion in cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Sarcophilus harrisii	54	BROADPEAK NARROWPEAK	Mark Dawson	Sep 28, 2019
GSE167071	Analysis of open chromatin structures in HCC827 CBX5 knockdown cells by ATAC seq analysis .	Expression profiling by high throughput sequencing	Homo sapiens	9	BROADPEAK SRA Run Selector	Narendra Wajapeyee	Feb 18, 2024
GSE202179	Antisense Oligonucleotide Rescue of CGG Expansion-Dependent FMR1 Mis-Splicing in Fragile X Syndrome Restores FMRP	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	57	BROADPEAK NARROWPEAK	Sneha Shah	Jun 14, 2023
GSE180762	Aryl hydrocarbon receptor activity downstream of IL-10 signaling is required to promote regulatory functions in human dendritic cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	44	BROADPEAK	Francesca R. Santoni de Sio	Mar 04, 2023
GSE67382	BAF controls genome accessibility	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	26	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Douglas Porter	Nov 12, 2015