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2739 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		BW
GSE29282	A Hybrid Mechanism of Action for BCL6 in B Cells Defined by Formation of Functionally Distinct Complexes at Enhancers and Promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	46	BED BW TXT WIG SRA Run Selector	Katerina Hatzi	Aug 05, 2013
GSE29714	Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3' UTRs and Near Stop Codons	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BW TXT SRA Run Selector	Christopher E Mason	May 17, 2012
GSE33092	Oncogenic BRAFV600E remodels the melanocyte transcriptome and induces BANCR to regulate melanoma cell migration [HT-seq]	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	4	BW GTF SRA Run Selector	Douglas Porter	Apr 28, 2012
GSE33816	RNA-seq analysis of K562 cells (K562-shX) with stable integration of a tet-inducible shRNA targeting a candidate (X) transcription factor from ENCODE/HudsonAlpha-MyersLab	Expression profiling by high throughput sequencing	Homo sapiens	12	BAM BW GTF SRA Run Selector	Anita Bansal	Dec 01, 2011
GSE35468	Transcriptome profiling of epidermal differentiation	Expression profiling by high throughput sequencing	Homo sapiens	3	BW SRA Run Selector	Douglas Porter	Feb 02, 2012
GSE36200	RAMPAGE dataset for the human K562 cell line	Expression profiling by high throughput sequencing	Homo sapiens	1	BED BW SRA Run Selector	Philippe Batut	Aug 30, 2012
GSE36213	Profiling of transcription start site expression in Drosophila and the human K562 cell line using RAMPAGE	Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	37	BED BW	Philippe Batut	Aug 29, 2012
GSE37169	Oncogenic BRAFV600E remodels the melanocyte transcriptome and induces BANCR to regulate melanoma cell migration	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by array	Homo sapiens	7	BW CEL GTF	Douglas Porter	Apr 28, 2012
GSE38541	Human PA-1 cells treated with scrambled or specific ASOs	Expression profiling by high throughput sequencing	Homo sapiens	2	BW SRA Run Selector	Ling-Ling Chen	Apr 26, 2013
GSE38548	Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by array Genome variation profiling by SNP array Methylation profiling by genome tiling array	Homo sapiens	106	BED BW CEL FPKM_TRACKING PROBSCOREISLAND TXT	Kornelia Polyak	Jun 09, 2015
GSE38676	Expression Analysis of Normal and Cancerous Prostate Cells	Expression profiling by high throughput sequencing	Homo sapiens	2	BW SRA Run Selector	Aaron Statham	Nov 30, 2012
GSE38677	Mapping of Transcription Start Sites of Normal and Cancerous Prostate Cells	Expression profiling by high throughput sequencing	Homo sapiens	2	BW SRA Run Selector	Aaron Statham	Nov 30, 2012
GSE38685	Normal and Cancerous Prostate Cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BW	Aaron Statham	Oct 16, 2012
GSE39757	Transcriptomic analysis of XIST+ and XIST- hES cells	Expression profiling by high throughput sequencing	Homo sapiens	2	BW SRA Run Selector	Céline Vallot	Dec 21, 2012
GSE40591	Genome-wide analysis of BRCA1 and PALB2 [ChIP-seq and RNA-seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BEDGRAPH BW WIG SRA Run Selector	Alessandro Gardini	Sep 30, 2013
GSE40632	Genome-wide analysis of the Integrator complex (HTS)	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	46	BEDGRAPH BW SRA Run Selector	Alessandro Gardini	Sep 09, 2014
GSE42413	The Evolution of Lineage-Specific Regulatory Activities in the Human Embryonic Limb	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	56	BAM BED BW SRA Run Selector	Justin Cotney	Jul 02, 2013
GSE43770	Vitamin d receptor-mediated stromal reprogramming suppresses pancreatitis and enhances pancreatic cancer therapy	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BW SRA Run Selector	Ruth T Yu	Oct 03, 2014
GSE43789	Physiological Vascular Permeability Requires Induction of Endothelial NR4A1 by Progesterone Receptor	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BW GTF XLSX	Lauren Goddard	Jan 01, 2014
GSE43791	Redefinition of Human Androgen Responsive Elements	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	40	BED BW TAGALIGN	Xun Lan	Jan 01, 2015