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151 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		HIC
GSE196450	Context-dependent perturbations in chromatin folding and the transcriptome by cohesin and related factors	Expression profiling by high throughput sequencing Other	Homo sapiens	126	BED BW HIC TXT	Ryuichiro Nakato	Jul 28, 2023
GSE215325	Doxorubicin Changes the Spatial Organization of the Genome around Active Promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	30	BW HIC	Maria Valieva	Mar 31, 2023
GSE146901	3D Genome Analysis Identifies Enhancer Hijacking Mechanism for High-Risk Factors in Human T-Lineage Acute Lymphoblastic Leukemial (T-ALL)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	52	BEDPE BW H5 HIC TXT XLS SRA Run Selector	Hong Wu	Mar 20, 2021
GSE236253	3D gene regulation network in glioma ferroptosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	18	BW HIC TXT	Niannian Li	Oct 23, 2023
GSE246125	3D genome topology distinguishes molecular subgroups of medulloblastoma	Expression profiling by high throughput sequencing Other	Homo sapiens	55	BEDGRAPH BEDPE BW HIC TSV WIG	Marco Gallo	Sep 29, 2024
GSE241283	A MYOD-SKP2 axis boosts tumorigenesis in fusion negative rhabdomyosarcoma by preventing differentiation through p57Kip2 targeting	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BED HIC TXT	Matteo Cassandri	Aug 30, 2023
GSE162148	A Pig BodyMap Transcriptome Reveals Diverse Tissue Physiologies and Evolutionary Dynamics of Transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Canis lupus familiaris Cavia porcellus Felis catus Gallus gallus Homo sapiens Macaca mulatta Mus musculus Oryctolagus cuniculus Ovis aries Rattus norvegicus Sus scrofa	553	HIC TXT	jin long	Apr 20, 2021
GSE235704	A SWI/SNF-dependent transcriptional regulation mediated by POU2AF2/C11orf53 at enhancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	50	BW HIC	Lu Wang	Jan 19, 2024
GSE155839	A Transcriptional State Driven by Yin Yang 1 Confers a Therapeutic Vulnerability in Glioblastoma Stem Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	21	BW HIC	Zhixin Qiu	Jun 01, 2022
GSE232887	A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BED BW COOL HIC NARROWPEAK	Marco Osterwalder	Jun 01, 2024
GSE174259	A multi-omic dissection of super-enhancer driven oncogenic gene expression programs in ovarian cancer	Expression profiling by high throughput sequencing	Homo sapiens	122	BW HIC TXT	Michael Ross Kelly	Jun 13, 2022
GSE232490	A multiscale 3D chromatin architecture that controls development of the humoral immune system is assembled by IKAROS	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	120	BEDGRAPH BW HIC TBI	Katia Georgopoulos	Nov 20, 2023
GSE144643	A phase separation mechanism underlies development of cancer and aberrant organization of three-dimensional chromatin structure	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	HIC	Gang Greg Wang	Apr 19, 2021
GSE121355	A pliable mediator acts as a functional, rather than an architectural bridge, between promoters and enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	201	BEDGRAPH BW HIC TXT SRA Run Selector	Seolkyoung Jung	Aug 01, 2019
GSE118912	Activity-by-Contact model of enhancer specificity from thousands of CRISPR perturbations	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	46	HIC TDF TXT	Jesse Engreitz	Oct 21, 2019
GSE107447	Altered chromosomal topology drives oncogenic programs in SDH-deficient GISTs	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	100	BED BW CSV HIC TXT	Yotam Drier	Oct 16, 2019
GSE108869	An alternative CTCF isoform antagonizes canonical CTCF occupancy and changes chromatin architecture to promote apoptosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	30	BW HIC NARROWPEAK TSV SRA Run Selector	Dipanjan Chowdhury	Jan 12, 2019
GSE111930	An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Gorilla gorilla Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	60	BW HIC TDF TXT SRA Run Selector	Lei Tian	Aug 11, 2020
GSE115862	Antisense lncRNA transcription mediates DNA demethylation to drive stochastic Protocadherin α promoter choice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	72	BW HIC SRA Run Selector	Daniele Canzio	Apr 15, 2019
GSE165209	BCL11B enhancer hijacking defines a subtype of lineage ambiguous stem cell leukemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	35	BEDPE BW H5 HIC MTX NARROWPEAK TSV	Chunxu Qu	May 19, 2021