GEO Browser - GEO

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277 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome variation profiling by genome tiling array			PAIR
GSE23682	Removing System Noise from Comparative Genomic Hybridization Data by Self-Self Analysis	Genome variation profiling by genome tiling array	Homo sapiens	3852	PAIR TXT	Yoon-Ha Lee	Jun 09, 2011
GSE49847	A comparative encyclopedia of DNA elements in the mouse genome	Expression profiling by high throughput sequencing Genome variation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	588	BAM BEDRNAELEMENTS BIGWIG BROADPEAK NARROWPEAK PAIR	ENCODE DCC	Aug 14, 2013
GSE25893	A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants	Genome variation profiling by SNP array SNP genotyping by SNP array Genome variation profiling by genome tiling array	Homo sapiens	385	CEL CHP CNCHP PAIR TIFF TXT	Stephen W Scherer	Jun 30, 2011
GSE27367	Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR	Genome variation profiling by SNP array SNP genotyping by SNP array Genome variation profiling by genome tiling array	Homo sapiens	375	CEL CHP PAIR TXT	Tracy Tucker	Feb 17, 2011
GSE67682	A genome-wide analysis of MDS and MDS/MPN patients	Genome variation profiling by genome tiling array	Homo sapiens	301	PAIR TXT	María Abáigar	Nov 21, 2016
GSE75671	Genome-Wide DNA Copy Number Analysis of Acute Lymphoblastic Leukemia Identifies New Genetic Markers Associated with Clinical Outcome	Genome variation profiling by genome tiling array	Homo sapiens	265	PAIR	Jesús Maria Hernández-Rivas	May 03, 2016
GSE65521	The genome-wide effects of ionising on mutation induction in the mammalian germline	Genome variation profiling by genome tiling array	Mus musculus	262	PAIR TXT	Adeolu Adewoye	Feb 04, 2015
GSE85010	Rare germline copy number variations and disease susceptibility in familial melanoma	Genome variation profiling by SNP array Genome variation profiling by genome tiling array	Homo sapiens	254	PAIR TXT	Rose Yang	Dec 01, 2016
GSE26494	array-CGH profiling of human neuroblastoma samples obtained from infants included in the INES99.1, INES99.2 and INES99.3 trials	Genome variation profiling by genome tiling array Genome variation profiling by array	Homo sapiens	218	GFF GPR PAIR PDF TXT	Gudrun Schleiermacher	Dec 07, 2011
GSE63623	Concurrent DNA copy number alterations and mutations in genes related to maintenance of genome stability in uninvolved glandular tissue from breast cancer patients	Genome variation profiling by genome tiling array	Homo sapiens	180	PAIR	Arkadiusz Piotrowski	Jul 30, 2015
GSE16400	The pitfalls of platform comparison: DNA copy number array technologies assessed	Genome variation profiling by genome tiling array Genome variation profiling by SNP array	Homo sapiens	179	CEL PAIR TXT	Christina Curtis	Dec 03, 2009
GSE75137	Population structure shapes copy number variation in malaria parasites	Genome variation profiling by genome tiling array	Plasmodium falciparum	175	PAIR TXT	Ian Harry Cheeseman	Nov 19, 2015
GSE117914	Copy Number Variation across 12 tribes of African cichlid species	Genome variation profiling by genome tiling array	Astatoreochromis alluaudi Astatotilapia bloyeti Astatotilapia calliptera Astatotilapia flaviijosephi Benthodesmus elongatus Boulengerochromis microlepis Callochromis macrops Copadichromis borleyi Copadichromis virginalis Coptodon deckerti Coptodon ejagham Coptodon fusiforme Coptodon kottae Coptodon zillii Cyathopharynx furcifer Cyphotilapia frontosa Cyprichromis leptosoma Diplotaxodon greenwoodi Eretmodus cyanostictus Haplochromis burtoni Haplochromis chilotes Haplochromis thereuterion Hemichromis fasciatus Julidochromis ornatus Konia eisentrauti Labeotropheus fuelleborni Lepidiolamprologus elongatus Lobochilotes labiata Maylandia zebra Neochromis omnicaeruleus Neolamprologus brichardi Nyassachromis microcephalus Ophthalmotilapia ventralis Oreochromis alcalicus Oreochromis grahami Oreochromis latilabris Oreochromis ndalalani Oreochromis niloticus Pallidochromis tokolosh Paralabidochromis sp. Pseudocrenilabrus multicolor victoriae Pundamilia nyererei Pungu maclareni Rhamphochromis longiceps Rubricatochromis bimaculatus Sarotherodon galilaeus Sarotherodon knauerae Sarotherodon lamprechti Sarotherodon melanotheron Stomatepia mariae Tropheops sp. 'red cheek' Tropheus moorii Variabilichromis moorii Xenotilapia spiloptera	168	PAIR TXT	Suzy CP Renn	Jul 26, 2019
GSE9313	Comparative genomic hybridization of human embryonic stem cell lines deposited in the National Stem Cell Bank	Genome variation profiling by genome tiling array	Homo sapiens	155	PAIR	Melodee Patterson	Oct 16, 2007
GSE77313	NOMO-1: A NOVEL GENE ALTERED IN COLORECTAL CANCER, MOSTLY WITHIN THE EARLY-ONSET SUBSET	Genome variation profiling by genome tiling array	Homo sapiens	146	PAIR	Juan Luis Garcia	Jan 28, 2016
GSE100845	CNV analysis of 140 Filipinos with Cleft Lip and/or Palate	Genome variation profiling by genome tiling array	Homo sapiens	140	BED PAIR TIFF TXT	J. Robert Manak	Jan 17, 2018
GSE67818	Sunitinib treatment exacerbates intratumoral heterogeneity in metastatic renal cancer (CGH)	Genome variation profiling by genome tiling array	Homo sapiens	128	PAIR	Fiach O'Mahony	May 25, 2015
GSE76708	Diversity and regulatory impact of copy number variation in the primate Macaca fascicularis	Genome variation profiling by SNP array Genome variation profiling by genome tiling array	Macaca fascicularis	126	CALLS PAIR TXT	Tobias Heckel	Feb 24, 2016
GSE54995	Esophageal Cancer Project	Genome variation profiling by genome tiling array	Homo sapiens	123	PAIR TXT	Lin Li	Mar 11, 2014
GSE50407	Oligonucleotide Array CGH Profiles of Breast Cancer Patients Treated with High Dose or Conventional Chemotherapy	Genome variation profiling by genome tiling array	Homo sapiens	117	PAIR	Philip C Schouten	Dec 22, 2014