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1178 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome variation profiling by genome tiling array			TXT
GSE150559	Direct and indirect targets of Arabidopsis ABI3: genome wide binding sites [ChIP-chip]	Genome variation profiling by genome tiling array	Arabidopsis thaliana	6	BAR CEL TXT	Sharyn E Perry	May 27, 2020
GSE20932	Preferential re-replication of Drosophila heterochromatin	Genome variation profiling by genome tiling array	Drosophila melanogaster	3	BED TXT	David M MacAlpine	Mar 18, 2010
GSE31900	Developmental Control of Gene Copy Number by Repression of Replication Initiation and Fork Progression	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Genome variation profiling by genome tiling array Expression profiling by high throughput sequencing	Drosophila melanogaster	16	BED TXT WIG	Terry L. Orr-Weaver	Oct 18, 2011
GSE39281	DNA copy number gain at 1q23.3 is associated with poor survival in metastatic bladder cancer [Agilent]	Genome variation profiling by genome tiling array	Homo sapiens	94	BED PDF TXT	Markus Riester	Jul 07, 2013
GSE42309	H2A.X function in mouse ESC and iPSC (ChIPSeq and CNVs)	Genome variation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	44	BED BEDGRAPH PAIR TXT	Andrew Zhuo Xiao	Sep 07, 2014
GSE45778	Murine polyploid trophoblast giant cells (TGCs) from day E9.5 implantation sites (experimental) vs E9.5 diploid embryos (control)	Genome variation profiling by genome tiling array	Mus musculus	3	BED TXT WIG	Jessica Von Stetina	Apr 30, 2013
GSE45787	Murine polyploid trophoblast giant cells from day E9.5 implantation sites	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome variation profiling by genome tiling array	Mus musculus	5	BED TXT WIG	Jessica Von Stetina	Apr 30, 2013
GSE56054	CGH of stages 10B and 13 amplifying follicle cells to determine the effect SuUR has on replication fork progression	Genome variation profiling by genome tiling array	Drosophila melanogaster	5	BED TXT	Terry L. Orr-Weaver	Nov 10, 2014
GSE56056	SuUR role in regulation of DNA replication	Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by genome tiling array	Drosophila melanogaster	18	BED TXT	Terry L. Orr-Weaver	Nov 10, 2014
GSE66690	CGH of stage 13 amplifying follicle cells to measure changes in replication fork progression in DNA damage checkpoint and double-strand break repair mutants	Genome variation profiling by genome tiling array	Drosophila melanogaster	25	BED TXT	Terry L. Orr-Weaver	Jun 18, 2015
GSE66691	Replication fork progression during re-replication requires the DNA damage checkpoint and double-strand break repair	Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by genome tiling array	Drosophila melanogaster	41	BED TXT	Terry L. Orr-Weaver	Jun 18, 2015
GSE100845	CNV analysis of 140 Filipinos with Cleft Lip and/or Palate	Genome variation profiling by genome tiling array	Homo sapiens	140	BED PAIR TIFF TXT	J. Robert Manak	Jan 17, 2018
GSE143565	Genomic Landscape and Therapeutic Targets of Adenosquamous Carcinoma of the Pancreas	Genome variation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	25	BED TXT	michael thomas barrett	Jan 14, 2020
GSE17292	CGH S2-DRSC Cells	Genome variation profiling by genome tiling array	Drosophila melanogaster	2	BEDGRAPH TXT	DCC modENCODE	Jul 29, 2009
GSE28178	Fat Body - CGH Differential Replication	Genome variation profiling by genome tiling array	Drosophila melanogaster	2	BEDGRAPH GFF3 TXT	DCC modENCODE	Mar 25, 2011
GSE28179	Midgut - CGH Differential Replication	Genome variation profiling by genome tiling array	Drosophila melanogaster	2	BEDGRAPH GFF3 TXT	DCC modENCODE	Mar 25, 2011
GSE147500	Long-term expansion with germline potential of human primordial germ cell-like cells in vitro	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome variation profiling by genome tiling array	Homo sapiens	51	BIGWIG TXT	Yukihiro Yabuta	Sep 23, 2020
GSE84674	Array-CGH for cell lines derived from paired primary and metastatic tumor	Genome variation profiling by genome tiling array	Homo sapiens	2	BW PDF TXT	Shumei Chia	Jul 21, 2017
GSE84676	Phenotype-driven precision oncology in patient-derived tumor models predict therapeutic response in squamous cell carcinoma	Expression profiling by array Genome variation profiling by genome tiling array	Homo sapiens	15	BW JPG PDF TIFF TXT	Shumei Chia	Jul 21, 2017
GSE76708	Diversity and regulatory impact of copy number variation in the primate Macaca fascicularis	Genome variation profiling by SNP array Genome variation profiling by genome tiling array	Macaca fascicularis	126	CALLS PAIR TXT	Tobias Heckel	Feb 24, 2016