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Platform GPL10018 Query DataSets for GPL10018
Status Public on Dec 31, 2010
Title Agilent Daphnia magna 4x44k oligonucleotide array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Daphnia magna
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's website for details: https://earray.chem.agilent.com/earray/
 
Description AMDID#:020740
ONLY CLONES OF INTEREST HAVE BEEN IDENTIFIED WITH GENBANK ACCESSION NUMBER.
 
Submission date Feb 05, 2010
Last update date Dec 31, 2010
Contact name Helen C Poynton
E-mail(s) helen.poynton@umb.edu
Phone 617-287-7323
Organization name UMass Boston
Department School for the Environment
Lab Poynton Lab
Street address 100 Morrissey Blvd.
City Boston
State/province MA
ZIP/Postal code 02125
Country USA
 
Samples (6) GSM506967, GSM506968, GSM506969, GSM506970, GSM506971, GSM506972
Series (1)
GSE20218 Gene expression profiles of Daphnia magna exposed to Cd at the 1/10 LC50

Data table header descriptions
ID
SPOT_ID Name of oligonucleotide or control RNA found at that location of microarray. The name of the oligonucleotide correspond to the EST_ID used to design the oligonucleotide
EST_ID Unique ID for each distinct EST used to design the 60-mer oligonucleotides. ID was assigned by the program which assembled the cDNA libraries into contigs. This ID does not refer to a public available database. Individual sequences are available by request.
GB_ACC GenBank Accession number for the corresponding EST for sequences submitted to GenBank
SEQUENCE sequence of the 60-mer oligonucleotide

Data table
ID SPOT_ID EST_ID GB_ACC SEQUENCE
45220 GE_BrightCorner
45050 GE_BrightCorner
44880 GE_BrightCorner
44710 DarkCorner
44540 DarkCorner
44370 DarkCorner
44200 DarkCorner
44030 DarkCorner
43860 DarkCorner
43690 DarkCorner
43520 DarkCorner
43350 DarkCorner
43180 DarkCorner
43010 DarkCorner
42840 DarkCorner
42670 DarkCorner
42500 DarkCorner
42330 DarkCorner
42160 DarkCorner
41990 DarkCorner

Total number of rows: 45220

Table truncated, full table size 3308 Kbytes.




Download family Format
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Supplementary data files not provided

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