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Platform GPL10112 Query DataSets for GPL10112
Status Public on Dec 31, 2010
Title [RaEx-1_0-st] Affymetrix Rat Exon 1.0 ST Array [CDF: ENTREZG 10]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Rattus norvegicus
Manufacturer Affymetrix
Manufacture protocol See manufacturer's web site
 
Description Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html

 
Submission date Feb 26, 2010
Last update date Dec 31, 2010
Contact name Chui Sun Yap
E-mail(s) chuisunyap@gmail.com
Organization name Duke-NUS
Street address 8, College Road
City Singapore
ZIP/Postal code 169857
Country Singapore
 
Samples (47) GSM516357, GSM516358, GSM516359, GSM516360, GSM516361, GSM516362 
Series (1)
GSE20550 A high resolution analyis of c-Myc-regulated gene expression dynamics.
Relations
Alternative to GPL6194 (Alternative CDF [official])

Data table header descriptions
ID
ENTREZ_GENE_ID
CHR NCBI RefSeq for chromosome of current build
STRAND strand (+|-)
START start
END
SPOT_ID

Data table
ID ENTREZ_GENE_ID CHR STRAND START END SPOT_ID
112400 112400 16 + 63937839 64125844 neuregulin 1
113882 113882 5 - 62965015 62955133 hemogen
113886 113886 10 + 57580720 57622477 kinesin family member 1C
113892 113892 4 - 119965210 119964477 camello-like 3
113893 113893 17 + 15907526 15915457 synuclein, beta
113894 113894 10 - 35762571 35751600 sequestosome 1
113898 113898 1 - 209586330 209583423 peroxiredoxin 5
113900 113900 1 - 185772209 185770329 nuclear protein 1
113901 113901 2 + 201385607 201431739 chitinase, acidic
113902 113902 19 + 14928604 14967034 carboxylesterase 3
113906 113906 12 + 41407173 41421320 heat shock 22kDa protein 8
113907 113907 1 + 185344568 185363789 SH3-binding kinase 1
113910 113910 3 + 119703501 119706361 prion protein dublet
113911 113911 1 + 155713518 155747594 guanylate cyclase 2d
113912 113912 11 - 84840453 84839085 reticulon 4 receptor
113914 113914 1 - 22046299 22045376 trace-amine-associated receptor 1
113917 113917 2 - 181598673 181598211 lens epithelial protein
113918 113918 8 - 128452186 128412082 X transporter protein 3
113919 113919 17 + 51089046 51095005 glutathione peroxidase 5
113922 113922 2 + 242760708 242792658 selenoprotein

Total number of rows: 21334

Table truncated, full table size 1661 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL10112_ENTREZG.pgf.gz 15.2 Mb (ftp)(http) PGF
GPL10112_RaEx10stv1_Rn_ENTREZG.cdf.gz 14.3 Mb (ftp)(http) CDF
GPL10112_RnEx10stv1_Rn_ENTREZG_map.txt.gz 1.4 Mb (ftp)(http) TXT

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