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Platform GPL12 Query DataSets for GPL12
Status Public on Oct 09, 2001
Title Stanford Zea mays
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Zea mays
 
Description A maize array fabricated with 5,376 unique expressed sequence tag (EST) clones sequenced from 4-day-old roots, immature ears and adult organ cDNA libraries.
mRNA source: Zea mays strain with genetic background K55 (75%), W23 (20%), Robertson's Mutator (5%).
 
Web link http://zmdb.iastate.edu/
Contributor(s) Cho Y, Walbot V
Citation(s) 12225584
Submission date Jun 11, 2001
Last update date May 26, 2005
Contact name Yangrae Cho
E-mail(s) yacho@sequence.stanford.edu
Phone 650-812-1976
Fax 650-812-1975
Organization name Stanford University
Department Biological Sciences
Lab V. Walbot
Street address 385 Serra Mall
City Stanford University
State/province CA
ZIP/Postal code 94305-8221
Country USA
 
Samples (24) GSM57, GSM58, GSM59, GSM60, GSM61, GSM62 
Series (1)
GSE141 Gene-expression profile comparisons distinguish seven organs of maize

Data table header descriptions
ID
Homologs PID-1 Top matching sequences to GenBank on March 1, 2001
Homologs PID-2 Top matching sequences to GenBank on March 1, 2001
Homologs PID-3 Top matching sequences to GenBank on March 1, 2001
SPOT_ID Spot identifier

Data table
ID Homologs PID-1 Homologs PID-2 Homologs PID-3 SPOT_ID
707001A02.x1 Homolog PID: 5803272 ESTs AU055950(S20175),C73125(E29... [Oryza sativa] Homolog PID: 804948 acyl-(acyl carrier protein) thio... [Arabidopsis thaliana] Homolog PID: 666431 707001A02.x1
707002E03.y1 Homolog PID: 553073 reverse transcriptase [Zea mays] Homolog PID: 4996367 polyprotein [Arabidopsis thaliana] Homolog PID: 3924609 putative polyprotein of LTR tran... [Arabidopsis thaliana 707002E03.y1
707002G11.y1 707002G11.y1
707003H06.x3 Homolog PID: 8778447 F18O14.3 [Arabidopsis thaliana] Homolog PID: 3152606 putative C3HC4-type RING zinc fi... [Arabidopsis thaliana] Homolog PID: 6646765 putative RING zinc finger protei. 707003H06.x3
707004B03.y1 Homolog PID: 8843774 gene_id:MYN8.6~similar to unknow... [Arabidopsis thaliana] 707004B03.y1
707004G10.x1 707004G10.x1
707001A04.x1 Homolog PID: 9759405 2-oxoglutarate/malate translocator [Arabidopsis thaliana] Homolog PID: 9759404 2-oxoglutarate/malate translocator [Arabidopsis thaliana] 707001A04.x1
707002E04.y1 Homolog PID: 3128218 putative katanin [Arabidopsis thaliana] Homolog PID: 11071813 probable katanin-like protein [Leishmania major] Homolog PID: 11071772 probable AAA ATPase [Leis 707002E04.y1
707003C01.x3 707003C01.x3
707003H07.x2 707003H07.x2
707004H03.x2 Homolog PID: 396149 chalcone flavonone isomerase [Zea mays] 707004H03.x2
707004A11.x2 707004A11.x2
707001C09.x1 707001C09.x1
707002B05.y1 707002B05.y1
707003C02.x2 707003C02.x2
707003H08.x4 Homolog PID: 6091731 hypothetical protein [Arabidopsis thaliana] Homolog PID: 6513939 hypothetical protein [Arabidopsis thaliana] Homolog PID: 1651805 hypothetical protein [Sy 707003H08.x4
707004G04.x2 707004G04.x2
707004D11.y1 707004D11.y1
707001E11.x1 Homolog PID: 4309698 putative glucosyltransferase [Arabidopsis thaliana] Homolog PID: 7267435 putative glucosyltransferase [Arabidopsis thaliana] Homolog PID: 7270062 707001E11.x1
707002F05.y1 Homolog PID: 10176795 gene_id:K5F14.2~pir||B71406~simi... Homolog PID: 11128415 bHLH transcription factor, putat... [Arabidopsis thaliana] Homolog PID: 2244797 hypothetical protein [ 707002F05.y1

Total number of rows: 5760

Table truncated, full table size 596 Kbytes.






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