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Platform GPL121 Query DataSets for GPL121
Status Public on Oct 01, 2002
Title Atlas Glass Human 1.0 Array (Cat. #7900-1)
Technology type spotted oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer BD Biosciences Clontech
Manufacture protocol see manufacturer's web site
 
Description Glass microarrays made with long (~80 bp) experimentally-tested oligonucleotides.
 
Web link http://www.clontech.com/atlas/index.shtml
Submission date Apr 24, 2002
Last update date Apr 09, 2008
Organization BD Biosciences Clontech
E-mail(s) tech@clontech.com
Phone 877-232-8995
URL http://www.clontech.com
Street address 1020 East Meadow Circle
City Palo Alto
State/province CA
ZIP/Postal code 94303-4230
Country USA
 
Samples (19) GSM21096, GSM21097, GSM21098, GSM21099, GSM21100, GSM21101 
Series (3)
GSE1288 Cytokine Stimulated Vs Unstimulated
GSE1291 Adenovirus vs Mock Infection
GSE1292 HSP27 3A vs WT

Data table header descriptions
ID unique reference number used by BD Biosciences Clontech to identify each gene in collection
GENE_NAME set of names commonly used for the gene, based on the current literature
COORDINATE array coordinate
GB_LIST GenBank accession number
SP_LIST SwissProt accession number
GENE_NUM gene number
GENE Entrez GENE ID
DESC description
CLASSIFICATION set of functional classifications for the gene

Data table
ID GENE_NAME COORDINATE GB_LIST SP_LIST GENE_NUM GENE DESC CLASSIFICATION
OH8309 mothers against decapentaplegic homolog 4 (DPC4; MADH4; SMAD4) A1a2 U44378 Q13485 CA251 4089 MAD (mothers against decapentaplegic, Drosophila) homolog 4 FG00 FT01 SB00
OH7886 breast cancer type 2 susceptibility protein (BRCA2) A1a3 U43746 P51587 748 675 breast cancer 2, early onset FG00 FY02 SN00
OH7849 colorectal cancer suppressor protein (DCC) A1a4 X76132 P43146 665 1630 deleted in colorectal carcinoma FG00 FR01 FV07 SB00
OH7561 Mdm2; p53-regulating protein A1a5 M92424 Q00987 O0061 4193 mouse double minute 2, human homolog of; p53-binding protein FG00 FT00 FO00 FC00 SN00
OH7710 MOESIN-ezrin-radixin-like protein (MERLIN); schwannomin (SCH); neurofibromatosis 2 (NF2) A1a6 L11353, Z22664, X72657, L27133 P35240 348 4771 neurofibromin 2 (bilateral acoustic neuroma) FG00 FT00 SB00
OH8025 retinoblastoma-like protein 2 (RBL2; RB2); 130-kDa retinoblastoma-associated protein A1a7 X74594 Q08999 C204 5934 retinoblastoma-like 2 (p130) FG00 FC00 FT00 SN00
OH7728 p53 cellular tumor antigen A1b1 M14694, M14695 P04637 38 7157 tumor protein p53 (Li-Fraumeni syndrome) FG00 FT00 FO00 SN00
OH7877 retinoblastoma-associated protein1 (RB1); phosphoprotein 110 (pp110) A1b2 M15400 P06400, P78499 709 5925 retinoblastoma 1 (including osteosarcoma) FG00 FC00 FT00 SN00
OH7805 Wilms' tumor protein (WT33; WT1) A1b3 X51630 P19544 573 7490 Wilms tumor 1 FG00 SN00
OH8531 phosphatase & tensin homolog (PTEN); mutated in multiple advanced cancers protein 1 (MMAC1); TEP1 A1b4 U92436 O00633, O02679 N253 5728 phosphatase and tensin homolog (mutated in multiple advanced cancers 1) FG00 FT03 SC00
OH7759 colorectal mutant cancer protein (MCC) A1b5 M62397 P23508 455 4163 mutated in colorectal cancers FG00 SX00
OH8034 cadherin1 (CDH1); epithelial cadherin (E-cadherin; CDHE); uvomorulin (UVO); CAM 120/80 A1b6 Z13009 P12830, Q14216 C215 999 cadherin 1, E-cadherin (epithelial) FT00 FG00 FD02 SB00
OH8579 ras-related protein RAP-1A; C21KG; KREV-1 protein; GTP-binding protein SMG-p21A; G-22K A1b7 M22995 P10113 N458 5906 RAP1A, member of RAS oncogene family FT04 FG00 SC00
OH7852 transforming growth factor beta receptor III (TGF beta receptor III; TGFR3); betaglycan A1c1 L07594 Q03167 67 7049 transforming growth factor, beta receptor III (betaglycan, 300kD) FR01 FG00 FV07 SB00 SF00
OH7834 prohibitin (PHB) A1c2 S85655, U17179 P35232 643 5245 prohibitin FG00 FT01 SC00
OH7715 tight junction protein 1 (TJP1); zonula occludens (ZO1) A1c3 L14837 Q07157 357 7082 tight junction protein 1 (zona occludens 1) FG00 FW02 SK00 SB00
OH8194 nucleoside diphosphate kinase A (NDKA); NDP kinase A; tumor metastatic process-associated protein; metastasis inhibition factor NM23 (NM23-H1) A1c4 X17620 P15531 C88 4830 non-metastatic cells 1, protein (NM23A) expressed in FG00 FO00 FB03 SN00 SC00
OH8477 maguk p55 subfamily member 2; MPP2 protein; discs large homolog 2 A1c5 X82895 Q14168 E233 4355 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) FG00 FD02 FT00 SB00
OH8397 maspin; protease inhibitor 5 (PI5) A1c6 U04313 P36952 E141 5268 serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 5 FG00 FU00 ST00
OH8400 LUCA2; lysosomal hyaluronidase 2 (HYAL2) ; PH-20 homolog A1c7 U09577 Q12891 E145 8692 hyaluronoglucosaminidase 2 FG00 FL02 SL00

Total number of rows: 1090

Table truncated, full table size 169 Kbytes.






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