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Platform GPL13331 Query DataSets for GPL13331
Status Public on Jun 30, 2011
Title Whole-Genome TilePath (WGTP) array
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
Manufacturer Wellcome Trust Sanger Institute
Manufacture protocol see Wellcome Trust Sanger Institute's The Copy Number Variation (CNV) Project Data Index website
 
Description spotted large insert BAC clones
 
Submission date Mar 25, 2011
Last update date Jun 30, 2011
Contact name Stephen W Scherer
E-mail(s) stephen.scherer@sickkids.ca
Organization name The Hospital for Sick Children
Department Genetics and Genomic Biology
Street address 686 Bay Street
City Toronto
State/province Ontario
ZIP/Postal code M5G 0A4
Country Canada
 
Samples (18) GSM697946, GSM697947, GSM697948, GSM697949, GSM697950, GSM697951 
Series (2)
GSE25893 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants
GSE28189 A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (WGTP)

Data table header descriptions
ID
Chrom Chromosome Number
ChrPos Chromosome position midpoint
GenPos Genomic Midpoint Position
RANGE_GB
RANGE_START
SPOT_ID

Data table
ID Chrom ChrPos GenPos RANGE_GB RANGE_START SPOT_ID
1 1 83829 83829 NC_000001.9 83829 Chr1tp-15B3
2 1 384407 384407 NC_000001.9 384407 Chr1tp-35F11
3 1 572064 572064 NC_000001.9 572064 Chr1tp-27B12
4 1 712564 712564 NC_000001.9 712564 Chr1tp-17A8
5 1 893882 893882 NC_000001.9 893882 Chr1tp-17A3
6 1 1032011 1032011 NC_000001.9 1032011 Chr1tp-1A6
7 1 1171211 1171211 NC_000001.9 1171211 Chr1tp-25A12
8 1 1249459 1249459 NC_000001.9 1249459 Chr1tp-25A11
9 1 1328239 1328239 NC_000001.9 1328239 Chr1-32k-6E11
10 1 1366155 1366155 NC_000001.9 1366155 Chr1tp-25A9
11 1 1401762 1401762 NC_000001.9 1401762 Chr1tp-25A8
12 1 1462861 1462861 NC_000001.9 1462861 Chr1tp-35F10
13 1 1664820 1664820 NC_000001.9 1664820 Chr1tp-25A7
14 1 1800719 1800719 NC_000001.9 1800719 Chr1tp-25A6
15 1 1919795 1919795 NC_000001.9 1919795 Chr1tp-1A4
16 1 2035983 2035983 NC_000001.9 2035983 Chr1tp-35E9
17 1 2111455 2111455 NC_000001.9 2111455 Chr1tp-25A5
18 1 2152325 2152325 NC_000001.9 2152325 Chr1tp-1A2
19 1 2255158 2255158 NC_000001.9 2255158 Chr1tp-25A4
20 1 2314952 2314952 NC_000001.9 2314952 Chr1tp-25A3

Total number of rows: 28833

Table truncated, full table size 1743 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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