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Platform GPL14360 Query DataSets for GPL14360
Status Public on Sep 01, 2011
Title BCCRC whole genome tilling path array v2 (March 2006 build)
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
Manufacturer Wan Lam lab, BCCRC array laboratory
Manufacture protocol ~27,000 bacterial artificial chromosomes (BACs) spotted in duplicate
 
 
Contributor(s) Chari R, Lockwood WW, Lam WL
Submission date Aug 29, 2011
Last update date Sep 01, 2011
Contact name Raj Chari
E-mail(s) rchari@bccrc.ca
Organization name BC Cancer Research Centre
Department Cancer Genetics and Developmental Biology
Lab Wan Lam Lab
Street address 675 West 10th Avenue
City Vancouver
State/province BC
ZIP/Postal code V5Z 1L3
Country Canada
 
Samples (271) GSM788655, GSM788656, GSM788657, GSM788658, GSM788659, GSM788660 
Series (2)
GSE31798 DNA copy number profiles of NSCLC tumors
GSE31800 DNA copy number and gene expression profiles of resected non-small cell lung cancer tumors

Data table header descriptions
ID
CLONE_ID Standard clone name
BCCRCName Alternate clone name
Chromosome Chromosomal location of DNA
RANGE_START Base pair start position on chromosome
RANGE_END Base pair end position on chromosome
SPOT_ID

Data table
ID CLONE_ID BCCRCName Chromosome RANGE_START RANGE_END SPOT_ID
1 RP11-281H9 N0281H09 5 128933631 129091165
2 RP11-193G12 N0193G12 3 150342809 150507473
3 RP11-192B18 N0192B18 X 86198880 86368726
4 RP11-186N22 N0186N22 11 120570232 120720681
5 RP11-185G19 N0185G19 3 197279380 197462738
6 RP11-181E17 N0181E17 5 138436673 138593767
7 RP11-179G8 N0179G08 1 29991004 30182250
8 RP11-174B10 N0174B10 1 66875683 67026138
9 RP11-173I16 N0173I16 5 54824395 54987398
10 RP11-85J4 N0085J04 2 222665791 222815946
11 RP11-84H19 N0084H19 4 162605211 162762995
12 RP11-80N6 N0080N06 X 17231725 17398738
13 RP11-78O5 N0078O05 19 21686275 21836714
14 RP11-74F7 N0074F07 8 142202743 142369651
15 RP11-73F12 N0073F12 3 121091573 121205097
16 RP11-70D24 N0070D24 16 78129275 78290954
17 RP11-67N2 N0067N02 2 237181720 237354696
18 --no_addl_info_18
19 RP11-548L20 N0548L20 4 33780705 33901900
20 RP11-525D19 N0525D19 1 145357581 145550490

Total number of rows: 53856

Table truncated, full table size 2508 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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