NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL15279 Query DataSets for GPL15279
Status Public on Feb 28, 2012
Title KTH human operon 34k spotted array
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Homo sapiens
Manufacturer KTH
Manufacture protocol In-house printed array using the Genetix printer.
 
 
Submission date Feb 27, 2012
Last update date Jan 18, 2013
Contact name Daniel Klevebring
E-mail(s) daniel.klevebring@ki.se
Phone +46709499915
Organization name Karolinska Institutet
Department Medical Epidemiology and Biostatistics
Street address Nobels väg 12A
City Stockholm
ZIP/Postal code 17177
Country Sweden
 
Samples (8) GSM881307, GSM881308, GSM881309, GSM881310, GSM881311, GSM881312 
Series (1)
GSE36112 The SCFFBXO28 ubiquitin ligase coordinates CDK activity with MYC-mediated transcription in the cell cycle and predicts poor survival in breast cancer

Data table header descriptions
ID Oligo ID
GB_LIST RefSeq accessions
GENE_ID Entrez Gene ID
UNIGENE UniGene ID
HGNC_SYMBOL HUGO Gene Nomenclature Committee (HGNC) gene symbol
GENE_NAME Gene description
SEQUENCE Oligo sequence
SPOT_ID

Data table
ID GB_LIST GENE_ID UNIGENE HGNC_SYMBOL GENE_NAME SEQUENCE SPOT_ID
HUMv301D01 NM_001669, NM_009589 414 Hs.528631 ARSD arylsulfatase D CTAAAGCAATAAAGTTCGGACAATGCAGAGAGGTCACCTTCCTTCTATGGCCTTGAAGAAACCCTGGAG
HUMv301H01 TTGGGGCGATGGCCTTTGGAGATTGCGTGTGGTGTTCAGGACTGTTCCTTGGTGTTTGAGGGAAACTTT no information
HUMv301L01 NM_001005505, NM_006030 9254 Hs.149443,Hs.476273 CACNA2D2 calcium channel, voltage-dependent, alpha 2/delta subunit 2 AAACAATCCCCATCAGGTAGCTGTCTAACCCCCAGCTGGGTCTAATCCTTCTCATTACCCACCCGACCT
HUMv301P01 NM_002793 5689 Hs.352768 PSMB1 proteasome (prosome, macropain) subunit, beta type, 1 GGATCTGCATAGTGACCAAAGAGGGCATCAGGGAGGAAACTGTTTCCTTAAGGAAGGACTGATCTGTGT
HUMv301D13 NM_173355 151531 Hs.128427 UPP2 uridine phosphorylase 2 ACTCCACCATGCACGGTGCTGCGATGTCACCATTATTAGAATCGGTACATCAGGGGGAATAGGGATTGC
HUMv301H13 NM_006890 1087 Hs.74466 CEACAM7 carcinoembryonic antigen-related cell adhesion molecule 7 CGTATTCTCGGAGCCACCCAAGCCCTCCATCACCAGCAACAACTTCAATCCGGTGGAGAACAAAGATATT
HUMv301L13 NM_144570 90861 Hs.513261 HN1L hematological and neurological expressed 1-like AGAAGAGTTCCTGCGCATGCAAGCCCTGCTGTGTGGCTGTCGTTTACATTTGGGAGGTGTCCTGTATGT
HUMv301P13 NM_020439 57172 Hs.199068 CAMK1G calcium/calmodulin-dependent protein kinase IG ACACTCCTCAAAAAGGCCAACAAAAAACAGAACTTCAAGTCGGAGGTCATGGTACCAGTTAAAGCCAGT
HUMv302D01 NM_006725 923 Hs.653185 CD6 CD6 molecule TGCCCCACTCCTTGTCCGGCAGGATGTACTACTCATGCAATGGGGAGGAGCTCACCCTCTCCAACTGCTC
HUMv302H01 NM_004376, NM_078470 1355 Hs.591916 COX15 COX15 homolog, cytochrome c oxidase assembly protein (yeast) CCTGGGACTGTGACTGCTTTTGAGAGCTCTTCAGAGATCATAAGAACTTGGGCTTTTCTACGAGATGACC
HUMv302L01 NM_015332 23386 Hs.488171 NUDCD3 NudC domain containing 3 GCATGGTCATTATTGTTGCATTCTAGCCTTGAGGTCCCAGGCCAACGTACACAGCAAACACCAGCATGGG
HUMv302P01 NM_000618 3479 Hs.160562 IGF1 insulin-like growth factor 1 (somatomedin C) TCTACCAACAAGAACACGAAGTCTCAGAGAAGGAAAGGTTGGCCAAAGACACATCCAGGAGGGGAACAGA
HUMv302D13 NM_015323 23376 Hs.149367 KIAA0776 KIAA0776 CAGATAGGATGCCTTTTCCAGTGGTAGGAGCATCTGTAAGTGCATTTAAATCATTAGAAGCTTTTTTCC
HUMv302H13 NM_000377 7454 Hs.2157 WAS Wiskott-Aldrich syndrome (eczema-thrombocytopenia) GCTTTTGGATCAAATCCGGCAGGGAATTCAGCTGAACAAGACCCCTGGGGCCCCAGAGAGCTCAGCGCT
HUMv302L13 NM_014432 53832 Hs.445868 IL20RA interleukin 20 receptor, alpha TCCTTATTGATATTATTGGTACAGGCAGACAACCCTGGTAGGAGAGATGGATTCTGGGGTCATGACCTT
HUMv302P13 NM_001037442, NM_014961 22902 Hs.7972 RUFY3 RUN and FYVE domain containing 3 CCTGGTATCTCTTCGGCAGCAGCTGGATGACCTCAGAGCTCTCAAGCATGAACTTGCCTTTAAGCTGCAG
HUMv303D01 NM_032822 84908 Hs.651151 FLJ14668 TGCCTACTTAGCCCCCTGAATTAACAGAGCCCAATTGAGACAAACCCCTGGCAACAGGAAATTCAAGGG
HUMv303H01 NM_004205, NM_171997 9099 Hs.524085 USP2 ubiquitin specific peptidase 2 GACCTGGACTTAAGAGAATTTGCCTCAGAAAACACCAACCATGCTGTTTACAACCTGTACGCTGTGTCC
HUMv303L01 AAAATGCTAATTTAAAAGGTCAAGTGAAGCTGCTCCTCACGTTTTGGCGTGCCTGCGCTCTCTGCAGGCA no information
HUMv303P01 NM_000065 729 Hs.481992 C6 complement component 6 ATGGAAATACTGCATCCTGGAAAGTGTTTGGCCTAGCACAATTACTGCTAGGCCCAGCACAATGAACAG

Total number of rows: 35712

Table truncated, full table size 4554 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap