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Platform GPL155 Query DataSets for GPL155
Status Public on Oct 01, 2002
Title Atlas Rat Stress Array (Cat. #7735-1)
Technology type spotted DNA/cDNA
Distribution commercial
Organism Rattus norvegicus
Manufacturer BD Biosciences Clontech
Manufacture protocol see manufacturer's web site
 
Description Nylon, rat cDNA array designed to study stress. The cDNA fragments (200-600 bp) are PCR-amplified using gene-specific primers, and are selected so that they lack repetitive elements and have minimal homology with other genes on the array.
 
Web link http://www.clontech.com/atlas/index.shtml
Submission date Apr 24, 2002
Last update date Apr 09, 2008
Organization BD Biosciences Clontech
E-mail(s) tech@clontech.com
Phone 877-232-8995
URL http://www.clontech.com
Street address 1020 East Meadow Circle
City Palo Alto
State/province CA
ZIP/Postal code 94303-4230
Country USA
 
Samples (19) GSM17216, GSM17217, GSM17218, GSM17219, GSM17220, GSM17221 
Series (2)
GSE1063 Vitamin E plus and minus
GSE8329 Gene expression profiling in the heart following exposure of rats to heat acclimation, its loss and re-induction.

Data table header descriptions
ID unique reference number used by BD Biosciences Clontech to identify each gene in collection
GENE_NAME set of names commonly used for the gene, based on the current literature
COORDINATE array coordinate
GB_LIST GenBank accession number
SWISSPROT SwissProt accession number
GENE Entrez GENE ID
DESC description
CLASSIFICATION set of functional classifications for the gene

Data table
ID GENE_NAME COORDINATE GB_LIST SWISSPROT GENE DESC CLASSIFICATION
R100 cyclin G-associated kinase (GAK) 10B D38560 P97874 cyclin G-associated kinase (GAK) FC02 SC00 SN00
R409 cyclin-dependent kinase 4 inhibitor 2B (CDKN2B); p14-INK4B; p15-INK5B 10C S79760 P55272 cyclin-dependent kinase 4 inhibitor 2B (CDKN2B); p14-INK4B; p15-INK5B FC03 FG00 SN00
R240 p21; CDK-interacting protein 1 (CIP1); WAF1 10D L41275 Q64315 p21; CDK-interacting protein 1 (CIP1); WAF1 FC03 SN00
R134 cyclin-dependent kinase inhibitor p27 (p27KIP1) 10E D83792 O35792 cyclin-dependent kinase inhibitor p27 (p27KIP1) FC03 SN00
R418 p55CDC; cell division control protein 20 10F U05341 Q62623 p55CDC; cell division control protein 20 FC04 SN00
R220 galactosyltransferase-associated protein kinase (GTA); CDC2-related protein kinase (CDC2L1) 10G L24388 P46892 galactosyltransferase-associated protein kinase (GTA); CDC2-related protein kinase (CDC2L1) FC02 FO10 SN00 SU00 SC00
R039 inhibitor of DNA binding 1 (ID1) 10H D10862 P41135 inhibitor of DNA binding 1 (ID1) FB03 SN00
R040 inhibitor of DNA binding 2 (ID2) 10I D10863 P41137 25587 Inhibitor of DNA binding 2, dominant negative helix-loop-helix protein FB03 SN00
R041 inhibitor of DNA binding 3 (ID3) 10J D10864 P41138 25585 Inhibitor of DNA binding 3, dominant negative helix-loop-helix protein FB03 SN00
R658 prothymosin-alpha (PTMA) 10K M20035, M86564 P06302 prothymosin-alpha (PTMA) FX00 SN00
R566 deoxyribonuclease I (DNase I; DNL1) 10L X56060 P21704 deoxyribonuclease I (DNase I; DNL1) FL00 FO03 SF00 SU00
635R purine-rich element-binding protein A (PURA); purine-rich single-stranded DNA-binding protein alpha (PUR-alpha) [rat homolog of human] 10M M96684 Q00577 5813 purine-rich element binding protein A FY04 FQ07 SN00
R565 O-6-methylguanine-DNA methyltransferase (MGMT); methylated-DNA-protein-cysteine methyltransferase 10N X54862 P24528 25332 O6-methylguanine-DNA methyltranferase FY02 SN00
R393 methyl-CpG-binding protein 2 (MECP2) 10O M94064 Q00566 methyl-CpG-binding protein 2 (MECP2) FQ00 SN00
R437 ras associated with diabetes protein (RAD1) 11B U12187 P55043 ras associated with diabetes protein (RAD1) FT00 SB00 SK00
R602 soluble superoxide dismutase 1 (SOD1) 11C Y00404 P07632 24786 Superoxide dimutase 1, soluble FL09 SC00
A062 manganese-containing superoxide dismutase 2 (Mn SOD2) 11D X56600 P07895 24787 Superoxide dimutase 2, mitochondrial FL09 FH05 SM00
A071 copper-zinc-containing superoxide dismutase 3 (Cu-Zn SOD3); extracellular SOD (ECSOD) 11E X94371 Q64667 25352 Superoxide dimutase 3 FL09 SF00
R553 cellular tumor antigen p53 (TP53) 11F X13058 P10361 cellular tumor antigen p53 (TP53) FG00 FO10 FB03 SN00
14R mdm2 protein; p53-associated protein + mdm2-A + mdm2-C [rat homolog of human] 11G Z12020, M92424 Q00987 4193 mouse double minute 2, human homolog of; p53-binding protein FB03 FQ07 SN00

Total number of rows: 216

Table truncated, full table size 34 Kbytes.






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