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Platform GPL156 Query DataSets for GPL156
Status Public on Oct 01, 2002
Title Atlas Rat Toxicology 1.2 Array (Cat. #7860-1)
Technology type spotted DNA/cDNA
Distribution commercial
Organism Rattus norvegicus
Manufacturer BD Biosciences Clontech
Manufacture protocol see manufacturer's web site
 
Description Nylon, rat cDNA array designed to study toxicology. The genes were assembled in collaboration with the Environmental Protection Agency (EPA). The cDNA fragments (200-600 bp) are PCR-amplified using gene-specific primers, and are selected so that they lack repetitive elements and have minimal homology with other genes on the array.
er
 
Web link http://www.clontech.com/atlas/index.shtml
Submission date Apr 24, 2002
Last update date Apr 09, 2008
Organization BD Biosciences Clontech
E-mail(s) tech@clontech.com
Phone 877-232-8995
URL http://www.clontech.com
Street address 1020 East Meadow Circle
City Palo Alto
State/province CA
ZIP/Postal code 94303-4230
Country USA
 
Samples (12) GSM17431, GSM17432, GSM17433, GSM17434, GSM17435, GSM17437 
Series (1)
GSE1094 effect of neuregulin on cardiocytes

Data table header descriptions
ID unique reference number used by BD Biosciences Clontech to identify each gene in collection
GENE_NAME set of names commonly used for the gene, based on the current literature
COORDINATE array coordinate
GB_LIST GenBank accession number
SP_LIST SwissProt accession number
GENE Entrez GENE ID
DESC description
CLASSIFICATION set of functional classifications for the gene

Data table
ID GENE_NAME COORDINATE GB_LIST SP_LIST GENE DESC CLASSIFICATION
RG146 annexin V (ANX5); lipocortin 5; placental anticoagulant protein I (PAP-I); endonexin II; calphobindin I (CBP-I); PP4; thromboplastin inhibitor; vascular anticoagulant alpha (VAC-alpha); anchorin CII A01a M21730, J03898, J03899 P14668 25673 Annexin V FT08 FT10 SF00 SC00 SB00
R071 cadherin 6; kidney-cadherin (K-cadherin) A01b D25290 P55280 25409 Cadherin 6 (K-cadherin) FD02 SB00
R165 cationic amino acid transporter 1 (CAT1); system Y+ basic amino acid transporter; ecotropic retroviral leukemia receptor; ecotropic retrovirus receptor (ERR) A01c U70476, D67087 P70608 25648 Solute carrier family 7 member A1 (amino acid transporter cationic 1) FI01 SB00
R077 CD1 antigen A01d D26439 Q63493 25109 CD1D antigen FA00 SB00
RG322 CD2, membrane glycoprotein, T-cell marker A01e X05111 P08921 25299 OX-45 surface antigen, homolog to human T lymphocyte CD2 antigen FA00 FE00 FD02 FR05 SB00
R481 CD24 antigen; heat stable antigen (HSA); nectadrin A01f U49062 Q07490 25145 CD24 antigen FA00 FD02 SB00
RG354 CD28 T-cell surface antigen A01g X55288 P31042 25660 CD28 antigen FA00 FR05 FE00 SB00
RG452 CD4 homologue, W3/25 antigen A01h M15768 P05540 24932 CD4 antigen (p55) FA00 FT01 FE00 SB00
RT189 CD40 antigen A01i AF241231 Q9JKE0 CD40 protein
R221 E-selectin; endothelial leukocyte adhesion molecule 1 (ELAM-1); leukocyte-endothelial cell adhesion molecule 2 (LECAM2); CD62E A01j L25527 P98105 E-selectin precursor; endothelial leukocyte adhesion molecule 1 (ELAM-1); leukocyte-endothelial cell adhesion molecule 2 (LECAM2); CD62E FD02 SB00
R072 fas antigen; fasL receptor; apoptosis antigen 1 (APO1; APT1); CD95 antigen A01k D26112 Q63199 fas antigen; fasL receptor precursor; apoptosis antigen 1 (APO1; APT1); CD95 antigen FO02 SB00
RT187 folate-binding protein A01l AF219904 Q9JL02 folate binding protein
R234 glypican 1; HSPG M12; nervous system cell-surface heparan sulfate proteoglycan A01m L34067 P35053 58920 glypican 1 FR05 SB00 SF00
RG341 integrin alpha 1 A01n X52140 P18614 25118 Integrin, alpha 1 FR05 FD01 SB00
R438 integrin beta 1 (ITGB1); fibronectin receptor beta subunit (FNRB) A02a U12309 P49134 24511 Integrin, beta 1 FR00 SB00
R496 integrin beta 4 (ITGB4) A02b U60096 Q64632 25724 Integrin, beta 4 FR05 FD00 SB00
R024 integrin-associated protein form 4 A02c AF017437 O35294 integrin-associated protein form 4 FD02 FD01 SB00
R313 interleukin 2 receptor alpha subunit (IL2R- alpha; IL2RA); TAC antigen; CD25 antigen A02d M55049 P26897 25704 Interleukin 2 receptor, alpha chain FR02 FE00 SB00 SF00
R322 interleukin 6 receptor type 1 (IL6R1); IL6R-alpha (IL6RA) A02e M58587 P22273 24499 Interleukin 6 receptor FR02 FE00 SB00 SF00
RG068 kidney band 3 anion exchange protein; solute carrier family 4 member 1 (SLC4A1); AE1 A02f J04793 P23562 24779 Solute carrier family 4, member 1, anion exchange protein 1 (kidney band 3) FI05 SB00

Total number of rows: 1185

Table truncated, full table size 157 Kbytes.






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