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Status |
Public on Aug 31, 2012 |
Title |
020310-Agilent Micropterus salmoides 15K |
Technology type |
spotted oligonucleotide |
Distribution |
custom-commercial |
Organism |
Micropterus salmoides |
Manufacturer |
Agilent |
Manufacture protocol |
SurePrint G3 Gene Expression Microarrays
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Contributor(s) |
Denslow N |
Submission date |
Jun 04, 2012 |
Last update date |
Aug 31, 2012 |
Contact name |
Christopher Joseph Martyniuk |
E-mail(s) |
CMARTYN@UFL.EDU
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Organization name |
UF
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Department |
Physiological Sciences
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Street address |
CEHT Mowry Road
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City |
Gainesville |
State/province |
FL |
ZIP/Postal code |
32611 |
Country |
USA |
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Samples (38)
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GSM942266, GSM942267, GSM942268, GSM942269, GSM942270, GSM942271
GSM942272, GSM942273, GSM942274, GSM942275, GSM942276, GSM942277, GSM942278, GSM942279, GSM942280, GSM942281, GSM942282, GSM942283, GSM942284, GSM942285, GSM942286, GSM942287, GSM942288, GSM942289, GSM942290, GSM942291, GSM942309, GSM942310, GSM942311, GSM942312, GSM942313, GSM942314, GSM942315, GSM942316, GSM942317, GSM942318, GSM942319, GSM942320
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Series (3) |
GSE38456 |
Characterizing gene regulatory networks in the brain of largemouth bass inhabiting rivers containing high levels of methyl-mercury (lab study) |
GSE38458 |
Characterizing gene regulatory networks in the brain of largemouth bass inhabiting rivers containing high levels of methyl-mercury (field study) |
GSE38474 |
Characterizing gene regulatory networks in the brain of largemouth bass inhabiting rivers containing high levels of methyl-mercury |
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Data table header descriptions |
ID |
Feature Number |
Row |
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Col |
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chr_coord |
|
SubTypeMask |
|
SubTypeName |
|
Start |
|
SEQUENCE |
|
ProbeUID |
|
ControlType |
|
ProbeName |
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GeneName |
|
SystematicName |
|
Description |
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SPOT_ID |
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Data table |
ID |
Row |
Col |
chr_coord |
SubTypeMask |
SubTypeName |
Start |
SEQUENCE |
ProbeUID |
ControlType |
ProbeName |
GeneName |
SystematicName |
Description |
SPOT_ID |
1 |
1 |
1 |
|
260 |
BrightCorner |
0 |
|
0 |
1 |
GE_BrightCorner |
GE_BrightCorner |
GE_BrightCorner |
|
CONTROL |
2 |
1 |
2 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
3 |
1 |
3 |
|
66 |
Structural |
0 |
|
1 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
CONTROL |
4 |
1 |
4 |
unmapped |
0 |
|
0 |
TACATTCCTGAGTTTGGACTGGTGCCCTGCTTTTTGGTGGATGCTTGTTCATTTCTTCTG |
3 |
0 |
UF_Msa_AF_109538 |
contig28184___1rc_nr1nt0 |
contig28184___1rc_nr1nt0 |
Unknown |
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5 |
1 |
5 |
unmapped |
0 |
|
0 |
ATCAGCCACACACATTTCATGCGGCCCAACCGACGTGATGGATAATGCACATGCCGGGTC |
5 |
0 |
UF_Msa_CF_125002 |
contig05280___0rc |
contig05280___0rc |
Unknown |
|
6 |
1 |
6 |
unmapped |
0 |
|
0 |
AGTCACGTCAGGCAGCGGCACTTCCTCAGTTCGTTCTTCGGTGGTGCTGGGATCACGCTG |
7 |
0 |
UF_Msa_CF_125378 |
LMB_S454.767.C1___0 |
LMB_S454.767.C1___0 |
Unknown |
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7 |
1 |
7 |
unmapped |
0 |
|
0 |
ATGGAGCAGCCATCACCCACAAATGACTCCAAGCATCTGCAGGAGGACACAGAGAGGGCC |
9 |
0 |
UF_Msa_CF_124689 |
contig18063___0 |
contig18063___0 |
Unknown |
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8 |
1 |
8 |
unmapped |
0 |
|
0 |
ATCTCATCACAGTTGGAAGTTTGACAGTGATTATGCGGGACAAGGAAATAGATGTTGCAG |
11 |
0 |
UF_Msa_CF_126632 |
contig20863___0 |
contig20863___0 |
Unknown |
|
9 |
1 |
9 |
unmapped |
0 |
|
0 |
CCGTCTGCTCTGTGAGGTTGTTTCGACCACACTGCAGTTTGGTTACTCCAAGCAGAAGTG |
13 |
0 |
UF_Msa_CF_120586 |
contig00574___0 |
contig00574___0 |
Unknown |
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10 |
1 |
10 |
unmapped |
0 |
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0 |
ATACCCTATCACTTACTGAGCAGGATCAACTTTCTCTGGCTTGTGAACTGAACCCATACC |
15 |
0 |
UF_Msa_AF_102349 |
contig13776___1_nr0nt |
contig13776___1_nr0nt |
Unknown |
|
11 |
1 |
11 |
unmapped |
0 |
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0 |
GTTGTGATGATGGAAGTTTACAGCTGCTTGGATTGTGCGAAGACTGCAACGATGGAGGAG |
17 |
0 |
UF_Msa_CF_118056 |
contig07154___0 |
contig07154___0 |
Unknown |
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12 |
1 |
12 |
unmapped |
0 |
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0 |
CAGAACATCGACTCAGTTCAAAACAGCATAGTGTGAATAATACTGAAGAGAAAGAGAACA |
19 |
0 |
UF_Msa_CF_122526 |
contig28460___0 |
contig28460___0 |
Unknown |
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13 |
1 |
13 |
unmapped |
0 |
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0 |
CCTGAAGAGAAGGCGAGTCCACGGCTAAAAATATAATAGCTAACACAAGATGGCCGGTTT |
21 |
0 |
UF_Msa_CF_122303 |
contig30948___0 |
contig30948___0 |
Unknown |
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14 |
1 |
14 |
unmapped |
0 |
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0 |
ATGGCGGCTGCTGCACGGTTCTTCATCCGAGGTGCACACTCGAGGCTTTCCATCTCCGGT |
23 |
0 |
UF_Msa_CF_122930 |
contig04243___0 |
contig04243___0 |
Unknown |
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15 |
1 |
15 |
unmapped |
0 |
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0 |
GCCAGAAGGACCTCAGACAAATTTAATGAATGGAATAAAATAAGCAGAATGCTTCTCATT |
25 |
0 |
UF_Msa_CF_125231 |
contig27010___0 |
contig27010___0 |
Unknown |
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16 |
1 |
16 |
unmapped |
0 |
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0 |
CCTGTGATCTGTTTTTCTGTACTGAGTAACTTTGTCTGTCTCTCAAACATGCAAAGCATT |
27 |
0 |
UF_Msa_CF_123297 |
contig02340___0 |
contig02340___0 |
Unknown |
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17 |
1 |
17 |
unmapped |
0 |
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0 |
CCTGTGTGTCCTTCCTGGGCTTCCTGGGAGCTCTGAAGGAGAACCGCTGTCTCCTCCTGA |
29 |
0 |
UF_Msa_AF_100367 |
contig26772___1rc_nrnt0 |
contig26772___1rc_nrnt0 |
Unknown |
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18 |
1 |
18 |
unmapped |
0 |
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0 |
TACCAGCAGGTGATGGCCTGGCACCAGAGGCACAGGCGTGCATACCGAAAGGCCTTTGAG |
31 |
0 |
UF_Msa_AF_109775 |
contig13093___1rc_nrnt |
contig13093___1rc_nrnt |
Unknown |
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19 |
1 |
19 |
unmapped |
0 |
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0 |
CATGGCGAACCTCGAGCATGCTGAGGACAACCCAAAAACATGTGAAAATGTCTGGTGACG |
33 |
0 |
UF_Msa_CF_120304 |
contig25333___0 |
contig25333___0 |
Unknown |
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20 |
1 |
20 |
unmapped |
0 |
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0 |
AAACGTGTTTCTGGGGGAGGTGGAGGTGTCTCTGGGCCTGTGGGACTGGACCTGCACTCA |
35 |
0 |
UF_Msa_AF_101251 |
contig03642___1rc_nr1nt0 |
contig03642___1rc_nr1nt0 |
Unknown |
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Total number of rows: 15744
Table truncated, full table size 2413 Kbytes.
Supplementary data files not provided |
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