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Platform GPL15650 Query DataSets for GPL15650
Status Public on Aug 31, 2012
Title 020310-Agilent Micropterus salmoides 15K
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Micropterus salmoides
Manufacturer Agilent
Manufacture protocol SurePrint G3 Gene Expression Microarrays
 
 
Contributor(s) Denslow N
Submission date Jun 04, 2012
Last update date Aug 31, 2012
Contact name Christopher Joseph Martyniuk
E-mail(s) CMARTYN@UFL.EDU
Organization name UF
Department Physiological Sciences
Street address CEHT Mowry Road
City Gainesville
State/province FL
ZIP/Postal code 32611
Country USA
 
Samples (38) GSM942266, GSM942267, GSM942268, GSM942269, GSM942270, GSM942271 
Series (3)
GSE38456 Characterizing gene regulatory networks in the brain of largemouth bass inhabiting rivers containing high levels of methyl-mercury (lab study)
GSE38458 Characterizing gene regulatory networks in the brain of largemouth bass inhabiting rivers containing high levels of methyl-mercury (field study)
GSE38474 Characterizing gene regulatory networks in the brain of largemouth bass inhabiting rivers containing high levels of methyl-mercury

Data table header descriptions
ID Feature Number
Row
Col
chr_coord
SubTypeMask
SubTypeName
Start
SEQUENCE
ProbeUID
ControlType
ProbeName
GeneName
SystematicName
Description
SPOT_ID

Data table
ID Row Col chr_coord SubTypeMask SubTypeName Start SEQUENCE ProbeUID ControlType ProbeName GeneName SystematicName Description SPOT_ID
1 1 1 260 BrightCorner 0 0 1 GE_BrightCorner GE_BrightCorner GE_BrightCorner CONTROL
2 1 2 66 Structural 0 1 1 DarkCorner DarkCorner DarkCorner CONTROL
3 1 3 66 Structural 0 1 1 DarkCorner DarkCorner DarkCorner CONTROL
4 1 4 unmapped 0 0 TACATTCCTGAGTTTGGACTGGTGCCCTGCTTTTTGGTGGATGCTTGTTCATTTCTTCTG 3 0 UF_Msa_AF_109538 contig28184___1rc_nr1nt0 contig28184___1rc_nr1nt0 Unknown
5 1 5 unmapped 0 0 ATCAGCCACACACATTTCATGCGGCCCAACCGACGTGATGGATAATGCACATGCCGGGTC 5 0 UF_Msa_CF_125002 contig05280___0rc contig05280___0rc Unknown
6 1 6 unmapped 0 0 AGTCACGTCAGGCAGCGGCACTTCCTCAGTTCGTTCTTCGGTGGTGCTGGGATCACGCTG 7 0 UF_Msa_CF_125378 LMB_S454.767.C1___0 LMB_S454.767.C1___0 Unknown
7 1 7 unmapped 0 0 ATGGAGCAGCCATCACCCACAAATGACTCCAAGCATCTGCAGGAGGACACAGAGAGGGCC 9 0 UF_Msa_CF_124689 contig18063___0 contig18063___0 Unknown
8 1 8 unmapped 0 0 ATCTCATCACAGTTGGAAGTTTGACAGTGATTATGCGGGACAAGGAAATAGATGTTGCAG 11 0 UF_Msa_CF_126632 contig20863___0 contig20863___0 Unknown
9 1 9 unmapped 0 0 CCGTCTGCTCTGTGAGGTTGTTTCGACCACACTGCAGTTTGGTTACTCCAAGCAGAAGTG 13 0 UF_Msa_CF_120586 contig00574___0 contig00574___0 Unknown
10 1 10 unmapped 0 0 ATACCCTATCACTTACTGAGCAGGATCAACTTTCTCTGGCTTGTGAACTGAACCCATACC 15 0 UF_Msa_AF_102349 contig13776___1_nr0nt contig13776___1_nr0nt Unknown
11 1 11 unmapped 0 0 GTTGTGATGATGGAAGTTTACAGCTGCTTGGATTGTGCGAAGACTGCAACGATGGAGGAG 17 0 UF_Msa_CF_118056 contig07154___0 contig07154___0 Unknown
12 1 12 unmapped 0 0 CAGAACATCGACTCAGTTCAAAACAGCATAGTGTGAATAATACTGAAGAGAAAGAGAACA 19 0 UF_Msa_CF_122526 contig28460___0 contig28460___0 Unknown
13 1 13 unmapped 0 0 CCTGAAGAGAAGGCGAGTCCACGGCTAAAAATATAATAGCTAACACAAGATGGCCGGTTT 21 0 UF_Msa_CF_122303 contig30948___0 contig30948___0 Unknown
14 1 14 unmapped 0 0 ATGGCGGCTGCTGCACGGTTCTTCATCCGAGGTGCACACTCGAGGCTTTCCATCTCCGGT 23 0 UF_Msa_CF_122930 contig04243___0 contig04243___0 Unknown
15 1 15 unmapped 0 0 GCCAGAAGGACCTCAGACAAATTTAATGAATGGAATAAAATAAGCAGAATGCTTCTCATT 25 0 UF_Msa_CF_125231 contig27010___0 contig27010___0 Unknown
16 1 16 unmapped 0 0 CCTGTGATCTGTTTTTCTGTACTGAGTAACTTTGTCTGTCTCTCAAACATGCAAAGCATT 27 0 UF_Msa_CF_123297 contig02340___0 contig02340___0 Unknown
17 1 17 unmapped 0 0 CCTGTGTGTCCTTCCTGGGCTTCCTGGGAGCTCTGAAGGAGAACCGCTGTCTCCTCCTGA 29 0 UF_Msa_AF_100367 contig26772___1rc_nrnt0 contig26772___1rc_nrnt0 Unknown
18 1 18 unmapped 0 0 TACCAGCAGGTGATGGCCTGGCACCAGAGGCACAGGCGTGCATACCGAAAGGCCTTTGAG 31 0 UF_Msa_AF_109775 contig13093___1rc_nrnt contig13093___1rc_nrnt Unknown
19 1 19 unmapped 0 0 CATGGCGAACCTCGAGCATGCTGAGGACAACCCAAAAACATGTGAAAATGTCTGGTGACG 33 0 UF_Msa_CF_120304 contig25333___0 contig25333___0 Unknown
20 1 20 unmapped 0 0 AAACGTGTTTCTGGGGGAGGTGGAGGTGTCTCTGGGCCTGTGGGACTGGACCTGCACTCA 35 0 UF_Msa_AF_101251 contig03642___1rc_nr1nt0 contig03642___1rc_nr1nt0 Unknown

Total number of rows: 15744

Table truncated, full table size 2413 Kbytes.




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