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Platform GPL16966 Query DataSets for GPL16966
Status Public on Apr 05, 2013
Title SMD Print_1590 CAT07L2 Saccharomyces cerevisiae
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Saccharomyces cerevisiae
Manufacturer Stanford Functional Genomics Facility, Stanford School of Medicine
Manufacture protocol Material is transferred from microtiter plate wells to the slide surface by an automated print head
Support glass
 
 
Submission date Apr 04, 2013
Last update date Apr 05, 2013
Organization Stanford Microarray Database (SMD)
E-mail(s) array@genome.stanford.edu
Phone 650-498-6012
URL http://genome-www5.stanford.edu/
Department Stanford University, School of Medicine
Street address 300 Pasteur Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Samples (3) GSM1115479, GSM1115483, GSM1115484
Series (2)
GSE45794 RNA coimmunoprecipitations
GSE45798 Defining the specificity of cotranslationally acting chaperones by systematic analysis of mRNAs associated with ribosome-nascent chain complexes.

Data table header descriptions
ID
ORGANISM
SEQUENCE
Reporter Group[Role]
Control Type
Composite Sequence Name
ORF ORF Name
Composite Element Comment[Type]
Composite Element Comment[Type]
Composite Element Comment[Type]
SPOT_ID

Data table
ID ORGANISM SEQUENCE Reporter Group[Role] Control Type Composite Sequence Name ORF Composite Element Comment[Type] Composite Element Comment[Type] Composite Element Comment[Type] SPOT_ID
1 Saccharomyces cerevisiae AAGGATCGGAGTACCTCAAGTGTTAGGTTTGATGAAAACTCACGTCTTTTAATCTACAAAAAATCTAAAA experimental S000000249 YBR045C GIP1 S000000249 Meiosis-specific regulatory subunit of the Glc7p protein phosphatase, regulates spore wall formation and septin organization, required for expression of some late meiotic genes and for normal localization of Glc7p
2 Saccharomyces cerevisiae CCTATTTTTTTTTTCTTATTCCAATATATTATTTTATCAGAAGACAGACAGCAAGAACGACAGCCTAAGT experimental S000000255 YBR051W S000000255 partiallly overlaps the REG2/YBR050C regulatory subunit of the Glc7p type-1 protein phosphatase
3 Saccharomyces cerevisiae ATCGACAAAGTTGACGATAACGATGATCTTAAAGAGTATGAAAATTCAGAATCGTCGGAAAATCCAAACA experimental S000000273 YBR069C TAT1 S000000273 overexpression confers FK506 and FTY720 resistance
4 Saccharomyces cerevisiae CGCTTTTCTATTGGAACTGCATATTTCTATTAGTTTCACCCGTTGTGGCCATTGGCTTGTATTTAATTTC experimental S000000278 YBR074W S000000278 Putative metalloprotease
5 Saccharomyces cerevisiae GTTGCAGGAGTGCAATTCGATGCGATGTGCTCGACTTTCAACAATATTCTCAGTACGTGTCTTGAGAAAT experimental S000000295 YBR091C TIM12 S000000295 component of the TIM22 complex, which is a twin-pore translocase that mediates insertion of numerous multispanning inner membrane proteins
6 Saccharomyces cerevisiae AGTAATAAGTCCTTCAAGATTCAGTGACGTTTTTATTCCTACACAAGTTACGGCAAATCTCACAATGTTA experimental S000000301 YBR097W VPS15 S000000301 interacts with the GDP-bound form of Gpa1p
7 Saccharomyces cerevisiae TTTTTACCTCCACCAACTCATAATGACAAACTTCCACTGCCAAGTATAGAACTAACTCAAGCGCAAATAA experimental S000000319 YBR115C LYS2 S000000319 activation requires posttranslational phosphopantetheinylation by Lys5p
8 Saccharomyces cerevisiae AACAAAGGTTCTTTTAGTTCCTTTATCTAACCACAAAGATTTAGTTCCTGTTCATCATGAAGTCGCCAAA experimental S000000325 YBR121C GRS1 S000000325 transcription termination factor that may interact with the 3'-end of pre-mRNA to promote 3'-end formation
9 Saccharomyces cerevisiae GGTGTTTGCGCCACAGAAAGATTGATTGCAAAAGATAATGACAAGTCCATCCAATACATTTCTCTATCTA experimental S000000649 YCR053W THR4 S000000649 expression is regulated by the GCN4-mediated general amino acid control pathway
10 Saccharomyces cerevisiae GGATACTTGTTGTCCTATGGGTCCTTCTTCCGTCTGCTAACATTTTTGATTCTGTTTTTGGTGCCCAACA experimental S000000657 YCR061W S000000657 induced by treatment with 8-methoxypsoralen and UVA irradiation
11 Saccharomyces cerevisiae CCTCATACACCAGTATTACTAAATTGACGAACCTAACAGAATTTAGGAATTTGATCAAGCAAAATGATAA experimental S000000679 YCR083W TRX3 S000000679 Mitochondrial thioredoxin, highly conserved oxidoreductase required to maintain the redox homeostasis of the cell, forms the mitochondrial thioredoxin system with Trr2p, redox state is maintained by both Trr2p and Glr1p
12 Saccharomyces cerevisiae GTGGAAAATGACAAGATTATCAATATTGAATTTGTCGACGATGACTGGTGGCTAGGGGAACTAGAGAAAG experimental S000000684 YCR088W ABP1 S000000684 Actin-binding protein of the cortical actin cytoskeleton, important for activation of the Arp2/3 complex that plays a key role actin in cytoskeleton organization
13 Saccharomyces cerevisiae CTCGGTGCTGATCACTATATTGCTATGTTGGAGGATAAAGGCTGGACAGAACAATACTCTAACGCTTTGG experimental S000000702 YCR105W ADH7 S000000702 may be involved in fusel alcohol synthesis or in aldehyde tolerance
14 Saccharomyces cerevisiae TATGCAGAAGCTGCTGCCGCATCATCAGGTTTGAAGTTACAATTTGCTCTACCACACGAAACTTTATATA experimental S000002162 YDL004W ATP16 S000002162 phosphorylated
15 Saccharomyces cerevisiae CGTTTACAACAACTACCCAATGAAGAACCTGCCGGACATGATTGAAGAATTAGATCTACATGAAGATTAG experimental S000002180 YDL022W GPD1 S000002180 homolog of Gpd2p
16 Saccharomyces cerevisiae GCCAAAATAGGCTGTTGGCTATTATGAATCCTGATGTGAAAATCCCATTTCCTGAACATACTAGCAATAA experimental S000002186 YDL028C MPS1 S000002186 substrates include SPB proteins Spc42p, Spc110p, and Spc98p, mitotic exit network protein Mob1p, and checkpoint protein Mad1p
17 Methanococcus jannaschii TAATGGTAATCTATACTCTCTTGGCCCCCATTCAGGATTGTTCATCCATGCCTCTCTTGCTCCAATAGCG Control control_spike_calibration CONTROL
18 Methanococcus jannaschii GGCTGGTAAAGGTTTAAGGCAGGGGTTTGAAGATGCTGGACCTGCAAGGAAGTAATTAACTAATTCTCCA Control control_mismatch CONTROL
19 Arabidopsis thaliana CGTGGGGTACTTTGCCCACAATCTTGGCCATTGAGTTCTTAGCCATTGCATTTGTTGAGCACCAGAGAAG Control control_spike_calibration CONTROL
20 Escherichia coli str. K-12 substr. MG1655 Control control_mismatch CONTROL

Total number of rows: 19968

Table truncated, full table size 3904 Kbytes.




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