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Platform GPL17082 Query DataSets for GPL17082
Status Public on Apr 27, 2013
Title [MTbH37Rva520730F] Affymetrix Mycobacterium tuberculosis H37Rv
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mycobacterium tuberculosis H37Rv
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site
 
 
Submission date Apr 26, 2013
Last update date May 14, 2013
Contact name Brian Weiner
E-mail(s) bweiner@broadinstitute.org
Organization name Broad Institute of MIT & Harvard
Department GSAP-Microbial Seq & Analysis
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Samples (35) GSM1130087, GSM1130088, GSM1130089, GSM1130090, GSM1130091, GSM1130092 
Series (2)
GSE46432 Analysis of the effects of the methyltransferase encoded by Rv3263 on gene expression in M. tuberculosis
GSE55647 Gene expression analysis of Mycobacterium tuberculosis high-persister (hip) mutants.

Data table header descriptions
ID
ORF ORF Name
SPOT_ID
Annotation.Date
Sequence.Source
Transcript.ID.Array.Design.
Target.Description
Representative.Public.ID
Genome.Version
Gene.Title
Gene.Symbol
SwissProt
EC

Data table
ID ORF SPOT_ID Annotation.Date Sequence.Source Transcript.ID.Array.Design. Target.Description Representative.Public.ID Genome.Version Gene.Title Gene.Symbol SwissProt EC
Rv3263_at Rv3263 31-Dec-05 TBDB SRv3263 PROBABLE DNA METHYLASE (MODIFICATION METHYLASE) (METHYLTRANSFERASE) Rv3263 V2 Rv3263 P96868 EC:2.1.1.-
TBID_IG_02927_at TBFG_02927 31-Dec-05 TBDB IG-fwdStrand-2765612-2765654 IG-fwdStrand-2765612-2765654 IG-fwdStrand-2765612-2765654 V2 IG_MTB000055_Rv2463 IG_MTB000055_Rv2463 ---
TBID_IG_02925_st TBFG_02925 31-Dec-05 TBDB IG-fwdStrand-2765405-2765540 IG-fwdStrand-2765405-2765540 IG-fwdStrand-2765405-2765540 V2 IG_MTB000054_MTB000055 IG_MTB000054_MTB000055 ---
Rv2463_at Rv2463 31-Dec-05 TBDB SRv2463 PROBABLE ESTERASELIPASE LIPP Rv2463 V2 Rv2463 lipP O53190 EC:3.1.-.-
TBID_IG_03830_at TBFG_03830 31-Dec-05 TBDB IG-revStrand-3642882-3642981 IG-revStrand-3642882-3642981 IG-revStrand-3642882-3642981 V2 IG_Rv3262_putative3643113 IG_Rv3262_putative3643113 ---
TBID_IG_02928_st TBFG_02928 31-Dec-05 TBDB IG-revStrand-2765612-2765654 IG-revStrand-2765612-2765654 IG-revStrand-2765612-2765654 V2 IG_MTB000055_Rv2463 IG_MTB000055_Rv2463 ---
TBID_IG_03832_at TBFG_03832 31-Dec-05 TBDB IG-revStrand-3643114-3643176 IG-revStrand-3643114-3643176 IG-revStrand-3643114-3643176 V2 IG_putative3643113_Rv3263 IG_putative3643113_Rv3263 ---
TBID_IG_02926_at TBFG_02926 31-Dec-05 TBDB IG-revStrand-2765405-2765540 IG-revStrand-2765405-2765540 IG-revStrand-2765405-2765540 V2 IG_MTB000054_MTB000055 IG_MTB000054_MTB000055 ---
TBID_IG_03834_st TBFG_03834 31-Dec-05 TBDB IG-revStrand-3644839-3644897 IG-revStrand-3644839-3644897 IG-revStrand-3644839-3644897 V2 IG_Rv3263_Rv3264c IG_Rv3263_Rv3264c ---
MTB000055_at MTB000055 31-Dec-05 TubercuList MTB000055 tRNA-Gly MTB000055 V2 MTB000055 glyV ---
TBID_IG_03831_st TBFG_03831 31-Dec-05 TBDB IG-fwdStrand-3643114-3643176 IG-fwdStrand-3643114-3643176 IG-fwdStrand-3643114-3643176 V2 IG_putative3643113_Rv3263 IG_putative3643113_Rv3263 ---
TBID_IG_03829_st TBFG_03829 31-Dec-05 TBDB IG-fwdStrand-3642882-3642981 IG-fwdStrand-3642882-3642981 IG-fwdStrand-3642882-3642981 V2 IG_Rv3262_putative3643113 IG_Rv3262_putative3643113 ---
Rv0142_at Rv0142 31-Dec-05 TBDB SRv0142 CONSERVED HYPOTHETICAL PROTEIN Rv0142 V2 Rv0142 P96819 ---
TBID_IG_03832_st TBFG_03832 31-Dec-05 TBDB IG-revStrand-3643114-3643176 IG-revStrand-3643114-3643176 IG-revStrand-3643114-3643176 V2 IG_putative3643113_Rv3263 IG_putative3643113_Rv3263 ---
TBID_IG_00137_at TBFG_00137 31-Dec-05 TBDB IG-fwdStrand-119700-119914 IG-fwdStrand-119700-119914 IG-fwdStrand-119700-119914 V2 IG_Rv0102_Rv0103c IG_Rv0102_Rv0103c ---
TBID_IG_00138_st TBFG_00138 31-Dec-05 TBDB IG-revStrand-119700-119914 IG-revStrand-119700-119914 IG-revStrand-119700-119914 V2 IG_Rv0102_Rv0103c IG_Rv0102_Rv0103c ---
TBID_IG_03833_at TBFG_03833 31-Dec-05 TBDB IG-fwdStrand-3644839-3644897 IG-fwdStrand-3644839-3644897 IG-fwdStrand-3644839-3644897 V2 IG_Rv3263_Rv3264c IG_Rv3263_Rv3264c ---
TBID_IG_03753_st TBFG_03753 31-Dec-05 TBDB IG-fwdStrand-3568680-3569108 IG-fwdStrand-3568680-3569108 IG-fwdStrand-3568680-3569108 V2 IG_Rv3197A_Rv3198c IG_Rv3197A_Rv3198c ---
Rv0093c_at Rv0093c 31-Dec-05 TBDB SRv0093c PROBABLE CONSERVED MEMBRANE PROTEIN Rv0093c V2 Rv0093c Q10890 ---
TBID_IG_03754_at TBFG_03754 31-Dec-05 TBDB IG-revStrand-3568680-3569108 IG-revStrand-3568680-3569108 IG-revStrand-3568680-3569108 V2 IG_Rv3197A_Rv3198c IG_Rv3197A_Rv3198c ---

Total number of rows: 13284

Table truncated, full table size 2050 Kbytes.




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Supplementary file Size Download File type/resource
GPL17082_MTbH37Rva520730F.CDF.gz 3.1 Mb (ftp)(http) CDF

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