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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jul 31, 2013 |
| Title |
Illumina CanineHD BeadChip |
| Technology type |
oligonucleotide beads |
| Distribution |
custom-commercial |
| Organism |
Canis lupus familiaris |
| Manufacturer |
Illumina, Inc. |
| Manufacture protocol |
See manufacturer's website
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| |
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| Description |
#Catalog number = WG-440-1001
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| |
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| Submission date |
Jul 23, 2013 |
| Last update date |
Feb 19, 2014 |
| Contact name |
SeungHyun Jung |
| E-mail(s) |
hyun@catholic.ac.kr
|
| Phone |
82-2-2258-7509
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| Organization name |
Catholic University of Korea
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| Department |
Department of Biochemistry
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| Street address |
catholic university, medical college, banpo-dong
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| City |
seoul |
| State/province |
seoul |
| ZIP/Postal code |
06591 |
| Country |
South Korea |
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| Samples (4830)
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GSM1194042, GSM1194043, GSM1194044, GSM1194045, GSM1194046, GSM1194047
GSM1194048, GSM1194049, GSM1251327, GSM1251328, GSM1251329, GSM1251330, GSM1251331, GSM1251332, GSM1251333, GSM1251334, GSM1251335, GSM1251336, GSM1251337, GSM1251338, GSM1251339, GSM1251340, GSM1251341, GSM1251342, GSM1251343, GSM1251344, GSM1251345, GSM1251346, GSM1251347, GSM1251348, GSM1251349, GSM1251350, GSM1251351, GSM1251352, GSM1251353, GSM1251354, GSM1251355, GSM1251356, GSM1251357, GSM1251358, GSM1251359, GSM1251360, GSM1251361, GSM1251362, GSM1251363, GSM1251364, GSM1251365, GSM1251366, GSM1251367, GSM1251368, GSM1251369, GSM1251370, GSM1251371, GSM1251372, GSM1251373, GSM1251374, GSM1251375, GSM1251376, GSM1251377, GSM1251378, GSM1251379, GSM1251380, GSM1251381, GSM1251382, GSM1251383, GSM1251384, GSM1251385, GSM1251386, GSM1251387, GSM1251388, GSM1251389, GSM1251390, GSM1251391, GSM1251392, GSM1251393, GSM1251394, GSM1251395, GSM1251396, GSM1251397, GSM1251398, GSM1251399, GSM1251400, GSM1251401, GSM1251402, GSM1251403, GSM1251404, GSM1251405, GSM1251406, GSM1251407, GSM1251408, GSM1251409, GSM1251410, GSM1251411, GSM1251412, GSM1251413, GSM1251414, GSM1251415, GSM1251416, GSM1251417, GSM1251418, GSM1251419, GSM1251420, GSM1251421, GSM1251422, GSM1251423, GSM1251424, GSM1251425, GSM1251426, GSM1251427, GSM1251428, GSM1251429, GSM1251430, GSM1251431, GSM1251432, GSM1251433, GSM1251434, GSM1251435, GSM1251436, GSM1251437, GSM1251438, GSM1251439, GSM1251440, GSM1251441, GSM1251442, GSM1251443, GSM1251444, GSM1251445, GSM1251446, GSM1251447, GSM1251448, GSM1251449, GSM1251450, GSM1251451, GSM1251452, GSM1251453, GSM1251454, GSM1251455, GSM1251456, GSM1251457, GSM1251458, GSM1251459, GSM1251460, GSM1251461, GSM1251462, GSM1251463, GSM1251464, GSM1251465, GSM1251466, GSM1251467, GSM1251468, GSM1251469, GSM1251470, GSM1251471, GSM1251472, GSM1251473, GSM1251474, GSM1251475, GSM1251476, GSM1251477, GSM1251478, GSM1251479, GSM1251480, GSM1251481, GSM1251482, GSM1251483, GSM1251484, GSM1251485, GSM1251486, GSM1251487, GSM1251488, GSM1251489, GSM1251490, GSM1251491, GSM1251492, GSM1251493, GSM1251494, GSM1251495, GSM1251496, GSM1251497, GSM1251498, GSM1251499, GSM1251500, GSM1251501, GSM1251502, GSM1251503, GSM1251504, GSM1251505, GSM1251506, GSM1251507, GSM1251508, GSM1251509, GSM1251510, GSM1251511, GSM1251512, GSM1251513, GSM1251514, GSM1251515, GSM1251516, GSM1251517, GSM1251518, GSM1251519, GSM1251520, GSM1251521, GSM1251522, GSM1251523, GSM1251524, GSM1251525, GSM1251526, GSM1251527, GSM1251528, GSM1251529, GSM1251530, GSM1251531, GSM1251532, GSM1251533, GSM1251534, GSM1251535, GSM1251536, GSM1251537, GSM1251538, GSM1251539, GSM1251540, GSM1251541, GSM1251542, GSM1251543, GSM1251544, GSM1251545, GSM1251546, GSM1251547, GSM1251548, GSM1251690, GSM1251691, GSM1251692, GSM1251693, GSM1251694, GSM1251695, GSM1251696, GSM1251697, GSM1251698, GSM1251699, GSM1251700, GSM1251701, GSM1251702, GSM1251703, GSM1251704, GSM1251705, GSM1251706, GSM1251707, GSM1251708, GSM1251709, GSM1251710, GSM1251711, GSM1251712, GSM1251713, GSM1251714, GSM1251715, GSM1251716, GSM1251717, GSM1251718, GSM1251719, GSM1251720, GSM1251721, GSM1251722, GSM1251723, GSM1251724, GSM1251725, GSM1251726, GSM1251727, GSM1251728, GSM1251729, GSM1251730, GSM1251731, GSM1251732, GSM1251733, GSM1251734, GSM1251735, GSM1251736, GSM1251737, GSM1251738, GSM1251739, GSM1251740, GSM1251741, GSM1251742, GSM1251743, GSM1251744, GSM1251745, GSM1256294, GSM1256295, GSM1256296, GSM1256297, GSM1256298, GSM1256299, GSM1256300, GSM1256301, GSM1256302, GSM1256303, GSM1256304, GSM1256305, GSM1256306, GSM1256307, GSM1256308, GSM1256309, GSM1256310, GSM1256311, GSM1256312, GSM1256313, GSM1256314, GSM1256315, GSM1256316, GSM1256317, GSM1256318, GSM1256319, GSM1256320, GSM1256321, GSM1256322, GSM1256323, GSM1256324, GSM1256325, GSM1256326, GSM1256327, GSM1256328, GSM1256329, GSM1256330, GSM1256331, GSM1256332, GSM1256333, GSM1256334, GSM1256335, GSM1256336, GSM1256337, GSM1256338, GSM1256339, GSM1256340, GSM1256341, GSM1256342, GSM1256343, GSM1256344, GSM1256345, GSM1256346, GSM1256347, GSM1256348, GSM1256349, GSM1256350, GSM1256351, GSM1256352, GSM1256353, GSM1256354, GSM1256355, GSM1256356, GSM1256357, GSM1256358, GSM1256359, GSM1256360, GSM1256361, GSM1256362, GSM1256363, GSM1256364, GSM1256365, GSM1256366, GSM1256367, GSM1256368, GSM1256369, GSM1256370, GSM1256371, GSM1256372, GSM1256373, GSM1256374, GSM1256375, GSM1256376, GSM1256377, GSM1256378, GSM1256379, GSM1256380, GSM1256381, GSM1256382, GSM1256383, GSM1256384, GSM1256385, GSM1256386, GSM1256387, GSM1256388, GSM1256389, GSM1256390, GSM1256391, GSM1256392, GSM1256393, GSM1256394, GSM1256395, GSM1256396, GSM1256397, GSM1256398, GSM1256399, GSM1256400, GSM1256401, GSM1256402, GSM1256403, GSM1256404, GSM1256405, GSM1256406, GSM1256407, GSM1256408, GSM1256409, GSM1256410, GSM1256411, GSM1256412, GSM1256413, GSM1256414, GSM1256415, GSM1256416, GSM1256417, GSM1256418, GSM1256419, GSM1256420, GSM1256421, GSM1256422, GSM1256423, GSM1256424, GSM1256425, GSM1256426, GSM1256427, GSM1256428, GSM1256429, GSM1256430, GSM1256431, GSM1256432, GSM1256433, GSM1256434, GSM1256435, GSM1256436, GSM1256437, GSM1256438, GSM1256461, GSM1256462, GSM1256463, GSM1256464, GSM1256465, GSM1256466, GSM1256467, GSM1256468, GSM1256469, GSM1256470, GSM1256471, GSM1256472, GSM1256473, GSM1256474, GSM1256475, GSM1256476, GSM1256477, GSM1256478, GSM1256479, GSM1256480, GSM1256481, GSM1256482, GSM1256483, GSM1256484, GSM1256485, GSM1256486, GSM1256487, GSM1256488, GSM1256489, GSM1256490, GSM1256491, GSM1256492, GSM1256493, GSM1256494, GSM1256495, GSM1256496, GSM1256497, GSM1256498, GSM1256499, GSM1256500, GSM1256501, GSM1256502, GSM1256503, GSM1256504, GSM1256505, GSM1256506, GSM1256507, GSM1256508, GSM1256509, GSM1256510, GSM1256511, GSM1256512, GSM1256513, GSM1256514, GSM1256515, GSM1256516, GSM1256517, GSM1256518, GSM1256519, GSM1256520, GSM1256521, GSM1256522, GSM1256523, GSM1256524, GSM1256525, GSM1256526, GSM1256527, GSM1256528, GSM1256529...
Accession list truncated, click here to browse through all related public accessions
You can also download a list of all accessions here
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| Series (30)
|
| GSE49123 |
De novo copy number variations in cloned dogs (Illumina SNP) |
| GSE49357 |
De novo copy number variations in cloned dogs |
| GSE51734 |
Dataset #3 for genome-wide analysis of heritable dog osteosarcoma in 3 breeds |
| GSE51973 |
Dataset #1 for genome-wide analysis of heritable dog osteosarcoma in 3 breeds |
| GSE51976 |
Dataset #2 for genome-wide analysis of heritable dog osteosarcoma in 3 breeds |
| GSE52147 |
Genome-wide analysis of heritable dog osteosarcoma in 3 breeds |
| GSE52221 |
Quantitative trait loci (QTL) study identifies novel genomic regions associated to Chiari-Like Malformation in Griffon Bruxellois dogs |
| GSE55134 |
Genome-wide copy number variant discovery in dogs using the CanineHD genotyping array |
| GSE66677 |
Effective population size, extended linkage disequilibrium and signatures of selection in the rare dog breed Lundehund |
| GSE70454 |
Comparison against 186 canid whole genome sequences reveals survival strategies of an ancient clonally transmissible canine tumor |
| GSE80315 |
Boxer dataset for genome-wide association study of modifiers of risk of canine degenerative myelopathy in dogs homozygous for SOD1 mutation |
| GSE80735 |
PWC dataset for genome-wide association study of modifiers of risk of canine degenerative myelopathy in dogs homozygous for SOD1 mutation |
| GSE83151 |
Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [COO] |
| GSE83154 |
Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [MEDI] |
| GSE83160 |
Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates |
| GSE83225 |
Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [CANE] |
| GSE90441 |
Whole genome sequence, SNP chips and pedigree structure |
| GSE96736 |
Genomic analyses reveal the influence of geographic origin, migration and hybridization on modern dog breed development |
| GSE102906 |
Whole genome QTL study identifies candidate loci associated to syringomyelia |
| GSE121027 |
Studies of modern Italian dog populations reveal multiple patterns for domestic breed evolution |
| GSE123368 |
SNP genotyping of various breeds |
| GSE141128 |
Identification of genetic susceptibility factors associated with canine gastric dilatation-volvulus |
| GSE143824 |
SNP genotyping of Highland Wild dogs, New Guinea Singing Dogs, and a dingo. |
| GSE147501 |
Genetic analysis of the modern Australian labradoodle dog breed reveals strong selection for poodle traits |
| GSE163783 |
Regulatory variants associated with canine hematopoietic cancers |
| GSE163784 |
Canine |
| GSE193384 |
SNP genotyping of dogs Patagonian Sheepdogs |
| GSE213053 |
Domestic dog lineages reveal genetic drivers of behavioral diversification |
| GSE219090 |
The dogs of Chernobyl: demographic insights into populations inhabiting the nuclear exclusion zone |
| GSE241367 |
Association analysis of invasive urinary carcinoma in the Shetland sheepdogs and related breeds. |
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| Data table header descriptions |
| ID |
|
| CHROMOSOME |
|
| Position |
|
| SNP |
|
| Plus/Minus Strand |
|
| CanineHD_A.bpm.Address |
|
| SPOT_ID |
|
| SNP_ID |
|
| Data table |
| ID |
CHROMOSOME |
Position |
SNP |
Plus/Minus Strand |
CanineHD_A.bpm.Address |
SPOT_ID |
SNP_ID |
| BICF2G630100019 |
25 |
34549096 |
[A/G] |
BOT |
25732300 |
BICF2G630100019 |
|
| BICF2G630100032 |
25 |
34560607 |
[A/G] |
BOT |
18759386 |
BICF2G630100032 |
|
| BICF2G630100034 |
25 |
34561954 |
[A/G] |
BOT |
13789354 |
BICF2G630100034 |
|
| BICF2G630100043 |
25 |
34587072 |
[A/G] |
BOT |
32780356 |
BICF2G630100043 |
|
| BICF2G630100054 |
25 |
34604596 |
[T/C] |
BOT |
21757302 |
BICF2G630100054 |
|
| BICF2G630100063 |
25 |
34615165 |
[A/G] |
BOT |
51809461 |
BICF2G630100063 |
|
| BICF2G630100075 |
25 |
34638645 |
[A/C] |
BOT |
55806509 |
BICF2G630100075 |
|
| BICF2G63010009 |
X |
95382735 |
[T/C] |
BOT |
41613463 |
BICF2G63010009 |
|
| BICF2G630100090 |
25 |
34688200 |
[T/C] |
BOT |
51730475 |
BICF2G630100090 |
|
| BICF2G630100094 |
25 |
34689509 |
[A/T] |
BOT |
53724487 |
BICF2G630100094 |
|
| BICF2G63010010 |
X |
95373856 |
[A/G] |
BOT |
49675468 |
BICF2G63010010 |
|
| BICF2G630100114 |
25 |
34706906 |
[A/G] |
BOT |
31646376 |
BICF2G630100114 |
|
| BICF2G630100129 |
25 |
34720916 |
[T/A] |
BOT |
67797310 |
BICF2G630100129 |
|
| BICF2G63010014 |
X |
95283962 |
[T/G] |
BOT |
69736392 |
BICF2G63010014 |
|
| BICF2G630100157 |
25 |
34757484 |
[T/G] |
BOT |
21692310 |
BICF2G630100157 |
|
| BICF2G63010018 |
X |
95187394 |
[A/C] |
BOT |
37610360 |
BICF2G63010018 |
|
| BICF2G63010019 |
X |
95184913 |
[A/C] |
BOT |
10699507 |
BICF2G63010019 |
|
| BICF2G630100197 |
25 |
34783041 |
[A/G] |
BOT |
54675369 |
BICF2G630100197 |
|
| BICF2G630100209 |
25 |
34802950 |
[T/C] |
BOT |
27802510 |
BICF2G630100209 |
|
| BICF2G630100251 |
25 |
34837371 |
[T/C] |
BOT |
65699351 |
BICF2G630100251 |
|
Total number of rows: 173662
Table truncated, full table size 10280 Kbytes.
| Supplementary data files not provided |
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