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Platform GPL17856 Query DataSets for GPL17856
Status Public on Oct 30, 2013
Title UWAPG Yeast 6K v1.0
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Saccharomyces cerevisiae
Manufacturer University of Wisconsin Genome Expression Center
Manufacture protocol Spotted DNA arrays were made in house using an OmniGrid spotting microarrayer to deposit 70mer oligos representing each yeast open reading frame (Qiagen Yeast Oligos V1.1.1) onto custom made poly-lysine coated glass microscope slides.
 
 
Submission date Oct 29, 2013
Last update date Oct 30, 2013
Contact name Audrey Gasch
E-mail(s) agasch@wisc.edu
Organization name University of Wisconsin - Madison
Department Genetics
Lab Gasch lab
Street address 425-G Henry Mall
City Madison
State/province WI
ZIP/Postal code 53706
Country USA
 
Samples (67) GSM1253693, GSM1253694, GSM1253695, GSM1253696, GSM1253697, GSM1253698 
Series (2)
GSE51844 Inferring the stress-activated signaling network in yeast through multi-omic data integration
GSE60613 Coordination and interconnectivity in the inferred stress-activated signaling network from yeast

Data table header descriptions
ID
ORF
ANNOTATION
CHROMOSOME (start:stop position)

Data table
ID ORF ANNOTATION CHROMOSOME (start:stop position)
YAL025C YAL025C YAL025C PAC cluster MAK16 ribosomal large subunit biogen molecular function unknown nucleolus | YAL026C chrI (100225:101145)
YAL066W YAL066W YAL066W ... | YAL067C chrI (10091:10399)
YAL024C YAL024C YAL024C ... LTE1 regulation of exit from mitosi guanyl-nucleotide exchange factor abud | YAL025C chrI (101565:105872)
YAL023C YAL023C YAL023C ... PMT2 O-linked glycosylation dolichyl-phosphate-mannose-protein endoplasmic reticulum | YAL024C chrI (106272:108551)
YAL022C YAL022C YAL022C ... FUN26 nucleoside transport nucleoside transporter activity membrane* | YAL023C chrI (108877:110430)
YAL021C YAL021C YAL021C ... CCR4 regulation of transcription fr 3'-5'-exoribonuclease activity cytoplasm* | YAL022C chrI (110846:113359)
YAL020C YAL020C YAL020C ... ATS1 budding cell bud growth* molecular function unknown cytoplasm | YAL021C chrI (113614:114615)
YAL019W-A YAL019W-A YAL019W-A ÷ Dubious Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence dataYAL026C-A chrI (114250:114819)
YAL019W YAL019W YAL019W ... FUN30 chromosome organization and bi molecular function unknown nucleus* | YAL020C chrI (114919:118314)
YAL065C YAL065C YAL065C ... YAL065C biological process unknown molecular function unknown cellular component unknown | YAL066W chrI (11565:11951)
YAL018C YAL018C YAL018C ... YAL018C biological process unknown molecular function unknown cellular component unknown | YAL019W chrI (118564:119541)
YAL017W YAL017W YAL017W ... PSK1 protein amino acid phosphoryla protein serine/threonine kise actcytoplasm | YAL018C chrI (120225:124295)
YAL064W-B YAL064W-B YAL064W-B ... YAL064W-B biological process unknown molecular function unknown cellular component unknown | YAL065C chrI (12046:12426)
YAL016C-B YAL016C-B YAL016C-B ... YAL016C-B biological process unknown molecular function unknown cellular component unknown | YAL016W chrI (124307:124492)
YAL016C-A YAL016C-A YAL016C-A ÷ Dubious Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence dataYAL019W-A chrI (124755:125069)
YAL016W YAL016W YAL016W ... TPD3 protein biosynthesis* protein phosphatase type 2A activitcytoplasm* | YAL017W chrI (124879:126786)
YAL015C YAL015C YAL015C ... NTG1 D repair* D-(apurinic or apyrimidinic site)nucleus* | YAL016C-B chrI (126903:128102)
YAL014C YAL014C YAL014C ... SYN8 transport SP receptor activity endosome | YAL015C chrI (128252:129019)
YAL013W YAL013W YAL013W ... DEP1 regulation of transcription fr molecular function unknown cellular component unknown | YAL014C chrI (129270:130487)
YAL012W YAL012W YAL012W ... CYS3 sulfur amino acid metabolism* cystathionine gamma-lyase activity cytoplasm | YAL013W chrI (130799:131983)

Total number of rows: 6953

Table truncated, full table size 1168 Kbytes.




Download family Format
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Supplementary file Size Download File type/resource
GPL17856_UWAPG_Yeast_6K_v1.0_DesignFile.ndf.gz 16.0 Mb (ftp)(http) NDF

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